RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GJB5O95377 273 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 POU3F2P20265 443 aaPredicted RBP13.77□□□□□ -0.21
CCDC50-201ENST00000392455 MARC2Q969Z3 335 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 WNT7BP56706 349 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF322Q6U7Q0 402 aaPredicted RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 NLRC3Q7RTR2 1065 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 FAM185AQ8N0U4 392 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 PRR11Q96HE9 360 aaPredicted RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SLC22A12Q96S37 553 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SCN3AQ9NY46 2000 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 UNC13CQ8NB66 2214 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 COL9A2Q14055 689 aaPredicted RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 MDGA2Q7Z553 956 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SFXN1Q9H9B4 322 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 AHCTF1Q8WYP5 2266 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 RNASET2O00584 256 aaKnown RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SLC43A1O75387 559 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SULT1C4O75897 302 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 C5AR1P21730 350 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 KIR2DS4P43632 304 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 RPS23P62266 143 aaKnown RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 KIR2DS1Q14954 304 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 FKRPQ9H9S5 495 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 KCNG2Q9UJ96 466 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 M0R3H8 397 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 CHRM4P08173 479 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 GIFP27352 417 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SEC61A1P61619 476 aaKnown RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 APOOLQ6UXV4 268 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 DGAT2L6Q6ZPD8 337 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 PRICKLE2Q7Z3G6 844 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 LILRB4Q8NHJ6 448 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 COPS9Q8WXC6 57 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 AKR1E2Q96JD6 320 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 BARX1Q9HBU1 254 aaPredicted RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 DBHP09172 617 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SFTPDP35247 375 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SNRPD2P62316 118 aaKnown RBP13.76□□□□□ -0.21
CCDC50-201ENST00000392455 BPIFB2Q8N4F0 458 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 SLC41A2Q96JW4 573 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 MED18Q9BUE0 208 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 PECRQ9BY49 303 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 NMES1Q9C002 83 aa13.76□□□□□ -0.21
CCDC50-201ENST00000392455 ACOT6Q3I5F7 207 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 CDC20BQ86Y33 519 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 MTURNQ8N3F0 131 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 OR5M8Q8NGP6 311 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 SPHK1Q9NYA1 384 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ATP5SQ99766 215 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ANKMY1Q9P2S6 941 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 GALR3O60755 368 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 OTX2P32243 289 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 SORDQ00796 357 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 DEFB134Q4QY38 66 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 EIF4E3Q8N5X7 224 aaKnown RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 OR10K1Q8NGX5 313 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 DUSP19Q8WTR2 217 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 FEVQ99581 238 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 NPIPB15A6NHN6 443 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TBCEQ15813 527 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 COQ3Q9NZJ6 369 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 MRPL15Q9P015 296 aaKnown RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ARL2-SNX15V9GYD0 113 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 G3V3Q6 166 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TGM1P22735 817 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ERHP84090 104 aaKnown RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 C1orf61Q13536 156 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 UBALD1Q8TB05 177 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 DOK4Q8TEW6 326 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 FAM71F1Q96KD3 344 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 HEYLQ9NQ87 328 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 THSD1Q9NS62 852 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM184BQ9Y519 407 aaPredicted RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 DCDC2BA2VCK2 349 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 HNRNPA1P09651 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF596Q8TC21 504 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 NPY6RQ99463 290 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 CTDSP1Q9GZU7 261 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 CLIC3O95833 236 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 DUSP1P28562 367 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF542PQ5EBM4 170 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 HENMT1Q5T8I9 393 aaKnown RBP13.75□□□□□ -0.21
CCDC50-201ENST00000392455 IGDCC3Q8IVU1 814 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM104Q8NE00 496 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 CREB3L4Q8TEY5 395 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 NAT6Q93015 286 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 IGSF21Q96ID5 467 aa13.75□□□□□ -0.21
CCDC50-201ENST00000392455 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms