RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LURAP1Q96LR2 239 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 PDCD1LG2Q9BQ51 273 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 DPH7Q9BTV6 452 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 CHAC1Q9BUX1 264 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 PRRG4Q9BZD6 226 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 TRIM4Q9C037 500 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 KRT23Q9C075 422 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLSTN2Q9H4D0 955 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 DUSP21Q9H596 190 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 PRKRIP1Q9H875 184 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 LINC00472Q9H8W2 130 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 ROPN1Q9HAT0 212 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 OBP2BQ9NPH6 170 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 FANCFQ9NPI8 374 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 HOXC10Q9NYD6 342 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 C6orf203Q9P0P8 240 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 SIGLEC7Q9Y286 467 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 MEMO1Q9Y316 297 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 RBM7Q9Y580 266 aaKnown RBP-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 KIDINS220Q9ULH0 1771 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 DOCK8Q8NF50 2099 aa-1.55□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLIT2O94813 1529 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ARHGAP35Q9NRY4 1499 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ATG2AQ2TAZ0 1938 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 DCCP43146 1447 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 NCOA3Q9Y6Q9 1424 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 UBR3Q6ZT12 1888 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CADPSQ9ULU8 1353 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLUHO75153 1309 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF532Q9HCE3 1301 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF724A8MTY0 619 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF736B4DX44 427 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 NEDD8-MDP1E9PL57 170 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 UPK1AO00322 258 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ACSL4O60488 711 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SS18L1O75177 396 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC25A12O75746 678 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CSF2P04141 144 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 TFF1P04155 84 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ALPPP05187 535 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC2A1P11166 492 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SPRR1BP22528 89 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCNOP22674 350 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 PON1P27169 355 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CD70P32970 193 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CFHR2P36980 270 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RPL27AP46776 148 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ALDH3A2P51648 485 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 HAMPP81172 84 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 PITPNAQ00169 270 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 GTF2BQ00403 316 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SPIBQ01892 262 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 IFIT5Q13325 482 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 GK2Q14410 553 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 LASP1Q14847 261 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SURF2Q15527 256 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ANO1Q5XXA6 986 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 Q6ZQT7 251 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 LRRC74BQ6ZQY2 392 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ERN2Q76MJ5 926 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 DCXRQ7Z4W1 244 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 LHFPL4Q7Z7J7 247 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 BIVMQ86UB2 503 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SVOPLQ8N434 492 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 EID2Q8N6I1 236 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 LRRC52Q8N7C0 313 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 Q8N976 141 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 DNAAF3Q8N9W5 541 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR2AP1Q8NGE2 309 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 M1APQ8TC57 530 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 DQX1Q8TE96 717 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 HTR3CQ8WXA8 447 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ASB13Q8WXK3 278 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 EXT2Q93063 718 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 FAM19A4Q96LR4 140 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 NSMCE2Q96MF7 247 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 TBCBQ99426 244 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RIT2Q99578 217 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 UPK3BQ9BT76 320 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RTFDC1Q9BY42 306 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCDC90BQ9GZT6 254 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 WWP1Q9H0M0 922 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RABEP2Q9H5N1 569 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMEM206Q9H813 350 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC39A9Q9NUM3 307 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RAI14Q9P0K7 980 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 IL36AQ9UHA7 158 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 AMACRQ9UHK6 382 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CTNNA3Q9UI47 895 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 TBX20Q9UMR3 447 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 WDR83OSQ9Y284 106 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 RRP7AQ9Y3A4 280 aaKnown RBP-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 NEUROG3Q9Y4Z2 214 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 THSD7AQ9UPZ6 1657 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 DOCK6Q96HP0 2047 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 EML6Q6ZMW3 1958 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 CEP192Q8TEP8 1941 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ATP10AO60312 1499 aa-1.56□□□□□ -2.66
RNU6-540P-201ENST00000384622 ADGRL2O95490 1459 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms