RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 EPHX4Q8IUS5 362 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 SLC25A36Q96CQ1 311 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 C7orf26Q96N11 449 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 SORCS2Q96PQ0 1159 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 RAD21L1Q9H4I0 556 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 SDR39U1Q9NRG7 319 aaPredicted RBP23.01■■□□□ 1.27
NPHP3-202ENST00000383282 CUBNO60494 3623 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 B9A039 149 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 UBDO15205 165 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 PHF1O43189 567 aaPredicted RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 LMX1BO60663 402 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 PDE5AO76074 875 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 HOXB1P14653 301 aaPredicted RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 ZNF43P17038 809 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 POLR2JP52435 117 aaKnown RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 SH3BGRP55822 239 aaPredicted RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 LGALS3BPQ08380 585 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 GGTLC2Q14390 218 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 C3orf36Q3SXR2 165 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 SLC9B1Q4ZJI4 515 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 ANKRD16Q6P6B7 361 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 BCL2L2Q92843 193 aaPredicted RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 VRK1Q99986 396 aaPredicted RBP23■■□□□ 1.27
NPHP3-202ENST00000383282 RPS6KB2Q9UBS0 482 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 KCNS2Q9ULS6 477 aa23■■□□□ 1.27
NPHP3-202ENST00000383282 A0A096LPE4 126 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 A0A1W2PPZ6 126 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 UPK3AO75631 287 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 PNMTP11086 282 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 RPS5P46782 204 aaKnown RBP22.99■■□□□ 1.27
NPHP3-202ENST00000383282 NAAAQ02083 359 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 CARTPTQ16568 116 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 VHLLQ6RSH7 139 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 SLC35B4Q969S0 331 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 SLCO1B3Q9NPD5 702 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 CRNNQ9UBG3 495 aaPredicted RBP22.99■■□□□ 1.27
NPHP3-202ENST00000383282 FBXO9Q9UK97 447 aaPredicted RBP22.99■■□□□ 1.27
NPHP3-202ENST00000383282 RCE1Q9Y256 329 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 CHST2Q9Y4C5 530 aa22.99■■□□□ 1.27
NPHP3-202ENST00000383282 NR4A2P43354 598 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 CLDN17P56750 224 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 ROR2Q01974 943 aaKnown RBP22.98■■□□□ 1.27
NPHP3-202ENST00000383282 RGNQ15493 299 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 FAM166AQ6J272 317 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 OR4F15Q8NGB8 312 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 BBS10Q8TAM1 723 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 VPS33AQ96AX1 596 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 BCL2L10Q9HD36 194 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 STAB1Q9NY15 2570 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 MXRA5Q9NR99 2828 aa22.98■■□□□ 1.27
NPHP3-202ENST00000383282 LOC390937A0A1W2PQ73 354 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 VSTM5A8MXK1 200 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 VWC2LB2RUY7 222 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 C5orf58C9J3I9 102 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 FTCDNL1E5RQL4 147 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 NR5A2O00482 541 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 SLC43A1O75387 559 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 OR4A8P0C604 315 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 CECR9P0C854 216 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 APEHP13798 732 aaKnown RBP22.97■■□□□ 1.27
NPHP3-202ENST00000383282 TUBA1BP68363 451 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 TUBA4AP68366 448 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 FADDQ13158 208 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 IQCCQ4KMZ1 466 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 TUBA1AQ71U36 451 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 LINGO2Q7L985 606 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 MIER2Q8N344 545 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 KDM8Q8N371 416 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 FAM169BQ8N8A8 192 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 ANKK1Q8NFD2 765 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 OR9I1Q8NGQ6 314 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 PTDSS2Q9BVG9 487 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 A4GALTQ9NPC4 353 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 PCDHB14Q9Y5E9 798 aa22.97■■□□□ 1.27
NPHP3-202ENST00000383282 CLIC1O00299 241 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 OR2T1O43869 369 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 IGLV1-44P01699 117 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 HOXC5Q00444 222 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 C1DQ13901 141 aaKnown RBP22.96■■□□□ 1.27
NPHP3-202ENST00000383282 EFNB3Q15768 340 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 ADIPOQQ15848 244 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 C5orf46Q6UWT4 87 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 GPR137CQ8N3F9 429 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 ANKS4BQ8N8V4 417 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 ZNF540Q8NDQ6 660 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 OXGR1Q96P68 337 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 OR52B2Q96RD2 323 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 PLK3Q9H4B4 646 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 C12orf10Q9HB07 376 aa22.96■■□□□ 1.27
NPHP3-202ENST00000383282 LOC100289279A0A1B0GTE1 492 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 RPL36A-HNRNPH2H7BZ11 118 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 AIM2O14862 343 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 AKAP8O43823 692 aaKnown RBP22.95■■□□□ 1.26
NPHP3-202ENST00000383282 NUDT7P0C024 238 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 PPOXP50336 477 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 GUCY1A3Q02108 690 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 EGR4Q05215 589 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 NUP37Q8NFH4 326 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 GTF2H4Q92759 462 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 SLC38A4Q969I6 547 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms