RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 SIRT4Q9Y6E7 314 aaPredicted RBP3.4□□□□□ -1.86
SMC6-202ENST00000381272 CLCA3PQ9Y6N3 262 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 ATG2AQ2TAZ0 1938 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 TRANK1O15050 2925 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 CDH23Q9H251 3354 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FANCMQ8IYD8 2048 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 A0A087WWL8 130 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 A0A0G2JMP0 313 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 LOC102723532A0A0G2JNH3 316 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 A0A0X1KG70 313 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FAM172BPA6NC97 362 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR6C70A6NIJ9 312 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 LRRC72A6NJI9 287 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 C12orf71A8MTZ7 269 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 E9PI62 339 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 SMLR1H3BR10 107 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PEX12O00623 359 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 P2RX6O15547 441 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RNF13O43567 381 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 LDB3O75112 727 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR5F1O95221 314 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 MRPL3P09001 348 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 CHRNB1P11230 501 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 IFI30P13284 250 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ELK1P19419 428 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TBXA2RP21731 343 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FPR3P25089 353 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 HTR2AP28223 471 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 SHC1P29353 583 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 HTR1FP30939 366 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PRKAR1BP31321 381 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FGF9P31371 208 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 IFNA8P32881 189 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RPS5P46782 204 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 INPP1P49441 399 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 EVX1P49640 407 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZNF136P52737 540 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FXYD6P3P58550 94 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RPS21P63220 83 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 ABATP80404 500 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TFF2Q03403 129 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 GPM6BQ13491 265 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR1Q1Q15612 314 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 MAPK14Q16539 360 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 NDUFA5Q16718 116 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 DEFB134Q4QY38 66 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 KLHL12Q53G59 568 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 EOGTQ5NDL2 527 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 FAM27D1Q5T7N8 215 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PRAMEF8Q5VWM4 474 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PRAMEF7Q5VXH5 474 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZNF57Q68EA5 555 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZNF425Q6IV72 752 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 HEPHL1Q6MZM0 1159 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 MFSD12Q6NUT3 480 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 CDC73Q6P1J9 531 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 CD200R1LQ6Q8B3 271 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZNF322Q6U7Q0 402 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZNF620Q6ZNG0 422 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TMEM91Q6ZNR0 172 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 VN1R4Q7Z5H5 301 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ASPGQ86U10 573 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 NOXA1Q86UR1 476 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 AMIGO1Q86WK6 493 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PAQR7Q86WK9 346 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 NR2C2APQ86WQ0 139 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 YAF2Q8IY57 180 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 LRRC25Q8N386 305 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 ARIH2OSQ8N7S6 290 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 C7orf57Q8NEG2 295 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR4M2Q8NGB6 313 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR4K14Q8NGD5 310 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 LILRB4Q8NHJ6 448 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 CCL4L1Q8NHW4 92 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 DNAJA4Q8WW22 397 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 LCN9Q8WX39 176 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 DDB2Q92466 427 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 AP3S1Q92572 193 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TSACCQ96A04 125 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 R3HDM4Q96D70 268 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RNF170Q96K19 258 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 C10orf90Q96M02 699 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 NECTIN4Q96NY8 510 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 SNX18Q96RF0 628 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 GDF15Q99988 308 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 SOSTQ9BQB4 213 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PRSS27Q9BQR3 290 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TIMM29Q9BSF4 260 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RPP25Q9BUL9 199 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 HCAR1Q9BXC0 346 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 RAB11FIP5Q9BXF6 653 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TEX12Q9BXU0 123 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 TTTY10Q9BZA0 68 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 HDHD2Q9H0R4 259 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 OR51V1Q9H2C8 321 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 PPIL3Q9H2H8 161 aaKnown RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 UBQLN3Q9H347 655 aa3.4□□□□□ -1.87
SMC6-202ENST00000381272 MTHFD2LQ9H903 347 aaPredicted RBP3.4□□□□□ -1.87
SMC6-202ENST00000381272 ZMAT3Q9HA38 289 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms