RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TNFRSF10CO14798 259 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 RGS11O94810 467 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 RABIFP47224 123 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 GBX2P52951 348 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 HACD4Q5VWC8 232 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC25A25Q6KCM7 469 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 TMEM65Q6PI78 240 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CA13Q8N1Q1 262 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 LMX1AQ8TE12 382 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 RBM18Q96H35 190 aaKnown RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 NRIP3Q9NQ35 241 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 HAO2Q9NYQ3 351 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 COPZ2Q9P299 210 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 HEATR5AQ86XA9 2040 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 GALR3O60755 368 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 ARL6IP5O75915 188 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SRMP19623 302 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC6A6P31641 620 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 ACAA2P42765 397 aaKnown RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 TSPAN5P62079 268 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 MGAT2Q10469 447 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 KIRREL2Q6UWL6 708 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 RGP1Q92546 391 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 FAM131CQ96AQ9 280 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SPACA7Q96KW9 195 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SEMA4CQ9C0C4 833 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 NCDNQ9UBB6 729 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SCP2D1Q9UJQ7 156 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 EML5Q05BV3 1969 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 ALDOBP05062 364 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 FCER2P06734 321 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 ANXA7P20073 488 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 AANATQ16613 207 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 UBE2NLQ5JXB2 153 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 ARHGAP11AQ6P4F7 1023 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 APOOLQ6UXV4 268 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 IDO2Q6ZQW0 420 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 FGD2Q7Z6J4 655 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 MCATQ8IVS2 390 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 DNAAF1Q8NEP3 725 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 LIN7BQ9HAP6 207 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 UBQLN2Q9UHD9 624 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 DTX4Q9Y2E6 619 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 OR6C68A6NDL8 312 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 B8ZZF3 427 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 CYR61O00622 381 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 MAOAP21397 527 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 LCN1P31025 176 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 DCTDP32321 178 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 RPL4P36578 427 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 YPEL5P62699 121 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 PLA2G7Q13093 441 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 EXOSC6Q5RKV6 272 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC22A10Q63ZE4 541 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 ZNF613Q6PF04 617 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 HSPA12BQ96MM6 686 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 TGM7Q96PF1 710 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 TSSK2Q96PF2 358 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 DNAJB12Q9NXW2 375 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 SATB2Q9UPW6 733 aa14.87□□□□□ -0.03
NKX3-1-201ENST00000380871 ARID1BQ8NFD5 2236 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 A0A1B0GVI7 797 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 TEX46H3BTG2 121 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 RPP14O95059 124 aaKnown RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 IFNGP01579 166 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 ATP1B1P05026 303 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 TMIGD3P0DMS9 266 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 MYF5P13349 255 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 TCTE1Q5JU00 501 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 NKAIN2Q5VXU1 208 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 KIAA0895LQ68EN5 471 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 SMRP1Q8NCR6 262 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 ZCCHC4Q9H5U6 513 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 MPDZO75970 2070 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 SPTY2D1-AS1A0A0U1RR47 76 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 GSTZ1O43708 216 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR7A10O76100 309 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 SERPINA3P01011 423 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 UBXN2BQ14CS0 331 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 CDONQ4KMG0 1287 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 CMIPQ8IY22 773 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 SAMD14Q8IZD0 417 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 GPBAR1Q8TDU6 330 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 MMABQ96EY8 250 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 C8orf33Q9H7E9 229 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 ICAM5Q9UMF0 924 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR10H1Q9Y4A9 318 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 A0A1B0GTH9 108 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR5K3A6NET4 321 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 IFITM5A6NNB3 132 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 M0R233 179 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 TNFSF14O43557 240 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 FMO6PO60774 539 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 ZFPL1O95159 310 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 CBX7O95931 251 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 IFNA7P01567 189 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR2T7P0C7T2 308 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 POU3F2P20265 443 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 CCR4P51679 360 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms