RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 HMX2A2RU54 273 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 APEX1P27695 318 aaKnown RBP14.87□□□□□ -0.03
COL2A1-202ENST00000380518 CHATP28329 748 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SLC9A3R2Q15599 337 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 LACC1Q8IV20 430 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 ZNF610Q8N9Z0 462 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SUMF2Q8NBJ7 301 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 OR52N1Q8NH53 320 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 KCNG3Q8TAE7 436 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 FRZBQ92765 325 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 BORCS7Q96B45 105 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SGK3Q96BR1 496 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 AMBRA1Q9C0C7 1298 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SNAPINO95295 136 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 CD14P08571 375 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 VEGFCP49767 419 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 MTCP1P56278 107 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 KDM4DQ6B0I6 523 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 MED25Q71SY5 747 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 LILRA3Q8N6C8 439 aaPredicted RBP14.87□□□□□ -0.03
COL2A1-202ENST00000380518 NIPAL2Q9H841 368 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 C19orf12Q9NSK7 152 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 MMACHCQ9Y4U1 282 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 NUMBLQ9Y6R0 609 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SHOXO15266 292 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CTNSO60931 367 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 UTS2O95399 124 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 MTHFD2P13995 350 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 ARNTP27540 789 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 HSD17B7P56937 341 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TMEM207Q6UWW9 146 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 AAED1Q7RTV5 226 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CNEP1R1Q8N9A8 125 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 RAB3CQ96E17 227 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 ZNF419Q96HQ0 510 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TEX37Q96LM6 180 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 PISDQ9UG56 409 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 PCDHGA1Q9Y5H4 931 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TMED7-TICAM2A0A0A6YYA0 188 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SOCS6O14544 535 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 ZNF780AO75290 641 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 JUNBP17275 347 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SLC35A1P78382 337 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TMEM255BQ8WV15 326 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SEMA6CQ9H3T2 930 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 LIN7BQ9HAP6 207 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 OBP2BQ9NPH6 170 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 GPR160Q9UJ42 338 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TMED7Q9Y3B3 224 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 HEMK1Q9Y5R4 338 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 A3GALT2U3KPV4 340 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 TRDV1A0A1B0GX56 115 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CSO75390 466 aaKnown RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CCSMST1Q4G0I0 132 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 OR52I1Q8NGK6 324 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 RAB39BQ96DA2 213 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 LAMB4A4D0S4 1761 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 A0A1W2PPV4 95 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 FAM155AB1AL88 458 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 PRKRAO75569 313 aaKnown RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 BMP1P13497 986 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CLDN17P56750 224 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 CMIPQ8IY22 773 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SDSLQ96GA7 329 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 GPR78Q96P69 363 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SNX18Q96RF0 628 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 UBQLN3Q9H347 655 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 SIAEQ9HAT2 523 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-202ENST00000380518 FGF21Q9NSA1 209 aa14.86□□□□□ -0.03
COL2A1-202ENST00000380518 DDAH2O95865 285 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 FCGR2AP12318 317 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 CD46P15529 392 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 PIGAP37287 484 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 MFAP5Q13361 173 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 MANEAQ5SRI9 462 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 ZNF684Q5T5D7 378 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 ESPNLQ6ZVH7 1005 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 LINC01465Q8N7H1 131 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 HAO2Q9NYQ3 351 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 NPAP1Q9NZP6 1156 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 SIGLEC6O43699 453 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 CBX7O95931 251 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 MSL3P1P0C860 447 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 MSR1P21757 451 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 BCL6P41182 706 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 RRAS2P62070 204 aaPredicted RBP14.85□□□□□ -0.03
COL2A1-202ENST00000380518 DCDP81605 110 aaKnown RBP14.85□□□□□ -0.03
COL2A1-202ENST00000380518 SLC22A25Q6T423 547 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 SLC16A11Q8NCK7 471 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 VN1R2Q8NFZ6 395 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 SLAMF9Q96A28 289 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 CAMK2AQ9UQM7 478 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 CEBPZOSA8MTT3 80 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 AP1G1O43747 822 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 SERPINA7P05543 415 aa14.85□□□□□ -0.03
COL2A1-202ENST00000380518 CSNK1EP49674 416 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms