RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF613Q6PF04 617 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 STK32CQ86UX6 486 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 TSPYL5Q86VY4 417 aaPredicted RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 KRTAP1-3Q8IUG1 177 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 CBR4Q8N4T8 237 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 SLC29A1Q99808 456 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 FNDC11Q9BVV2 318 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 TMEM185BQ9H7F4 350 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 MCTS1Q9ULC4 181 aaKnown RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 U3KQV3 271 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 VPS13CQ709C8 3753 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 TRAPPC13A5PLN9 417 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 PDLIM1O00151 329 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 GTPBP1O00178 669 aaKnown RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 SOCS2O14508 198 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 AQP8O94778 261 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 HEXAP06865 529 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 UBTFL6P0CB48 400 aaPredicted RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 GKN3PP0CG01 181 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 PRG2P13727 222 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 HTR2AP28223 471 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 SLC6A8P48029 635 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 ALDH3A2P51648 485 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 PPP2R2BQ00005 443 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 DAG1Q14118 895 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 IZUMO2Q6UXV1 221 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 C20orf204Q6ZNR8 217 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 PLEKHM3Q6ZWE6 761 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 LINC00471Q8N535 108 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 RDH12Q96NR8 316 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 ZNF184Q99676 751 aaPredicted RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 RBM4BQ9BQ04 359 aaKnown RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 FUZQ9BT04 418 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 RBM4Q9BWF3 364 aaKnown RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 TMEM27Q9HBJ8 222 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 FANCFQ9NPI8 374 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 EI24O14681 340 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 CYP7B1O75881 506 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 ALPLP05186 524 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 UQCRBP14927 111 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 PPP1R8Q12972 351 aaKnown RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 TRAM2Q15035 370 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 OR1Q1Q15612 314 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 MICAQ29983 383 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 TBPL2Q6SJ96 375 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 WFDC8Q8IUA0 241 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 LRRC75A-AS1Q8N1F1 130 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 GIPC3Q8TF64 312 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 TACO1Q9BSH4 297 aaKnown RBP12.25□□□□□ -0.45
PRPF18-202ENST00000378572 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
PRPF18-202ENST00000378572 IGLV3-32A0A0A0MS00 114 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 CPSF4LA6NMK7 179 aaKnown RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 CXCL13O43927 109 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ADAM11O75078 769 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ANXA8P13928 327 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ZNF17P17021 662 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 PCSK6P29122 969 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 HSPA13P48723 471 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 RNF144AP50876 292 aaPredicted RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 SUMO3P55854 103 aaPredicted RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 HOXC5Q00444 222 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ZNF117Q03924 483 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 OTUD3Q5T2D3 398 aaPredicted RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 FAHD1Q6P587 224 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 GGNQ86UU5 652 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 HS3ST5Q8IZT8 346 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 OR6K3Q8NGY3 331 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 SLC7A13Q8TCU3 470 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ARSGQ96EG1 525 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 C12orf49Q9H741 205 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 PDP1Q9P0J1 537 aaPredicted RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 RHCGQ9UBD6 479 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 CARD8Q9Y2G2 431 aa12.24□□□□□ -0.45
PRPF18-202ENST00000378572 MAGED1Q9Y5V3 778 aaPredicted RBP12.24□□□□□ -0.45
PRPF18-202ENST00000378572 ABCA2Q9BZC7 2435 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 A0A087WZY1 265 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 A0A0B4J2E0 115 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 TRBV4-1A0A0J9YWV2 114 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 A0A1B0GX12 115 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 TRIM64A6NGJ6 449 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 TNFSF11O14788 317 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 OIP5O43482 229 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 CCNB2O95067 398 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 LY6G6DO95868 133 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 CGAP01215 116 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 THY1P04216 161 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 P2RX1P51575 399 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 AQP4P55087 323 aa12.23□□□□□ -0.45
PRPF18-202ENST00000378572 COPZ1P61923 177 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms