RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TMEM233B4DJY2 109 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 PDE6DO43924 150 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 RRASP10301 218 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 LAMP1P11279 417 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HRH2P25021 359 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TACR1P25103 407 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HBA1P69905 142 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR51F2Q8NH61 342 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GPR61Q9BZJ8 451 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CSNK1G1Q9HCP0 422 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 SCN4AP35499 1836 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HLA-DQB2P05538 268 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 FOXK1P85037 733 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GRB7Q14451 532 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 AGBL4Q5VU57 503 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR2A2Q6IF42 318 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 WDR88Q6ZMY6 472 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TMEM217Q8N7C4 229 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 C7orf43Q8WVR3 580 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 NPAS1Q99742 590 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 WDR61Q9GZS3 305 aaKnown RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 SGK494L7N484 410 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 BET1O15155 118 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ABHD16AO95870 558 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GLAP06280 429 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HIST1H1CP16403 213 aaKnown RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 NAGAP17050 411 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GABRR1P24046 479 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 EMP3P54852 163 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 IAH1Q2TAA2 248 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR2G6Q5TZ20 316 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 SAMD13Q5VXD3 122 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CILP2Q8IUL8 1156 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ZNF321PQ8N8H1 164 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR52P1PQ8NH57 321 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 FKRPQ9H9S5 495 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 NRIP3Q9NQ35 241 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 NECAP2Q9NVZ3 263 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ARHGEF5Q12774 1597 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 PSMB6P28072 239 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 CSF2RBP32927 897 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 DGKEP52429 567 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 CSNK1G2P78368 415 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SIAH3Q8IW03 269 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 OR10P1Q8NGE3 313 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 DDOQ99489 341 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 TGIF2-C20orf24A0A0A6YYL0 155 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 GPR37O15354 613 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 AQP8O94778 261 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 RECKO95980 971 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 COX6CP09669 75 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 CRISP2P16562 243 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 EMP2P54851 167 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 CLEC1AQ8NC01 280 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 OR52L2PQ8NGH6 319 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 ASB11Q8WXH4 323 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 L3HYPDHQ96EM0 354 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 NDRG2Q9UN36 371 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TGM5O43548 720 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 NDUFB2O95178 105 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SCNN1AP37088 669 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 ADPRHP54922 357 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 NFATC2Q13469 925 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 GAB4Q2WGN9 574 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 IGDCC3Q8IVU1 814 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 OR6K3Q8NGY3 331 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 ACO2Q99798 780 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 ATF6BQ99941 703 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TMEM59Q9BXS4 323 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TMEM59LQ9UK28 342 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 FZD10Q9ULW2 581 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 OARD1Q9Y530 152 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SEC16AO15027 2179 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 YDJCA8MPS7 323 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 ST8SIA3O43173 380 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 DSC2Q02487 901 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SSBP1Q04837 148 aaKnown RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 DOC2AQ14183 400 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
LIG3-202ENST00000378526 NUP43Q8NFH3 380 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SLC25A46Q96AG3 418 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 CEP170Q5SW79 1584 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 PPM1DO15297 605 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 TSPAN13O95857 204 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 BPIFB3P59826 476 aa8.17□□□□□ -1.1
LIG3-202ENST00000378526 SELENOWP63302 87 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms