RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RPL23AP62750 156 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 G0S2P27469 103 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SERF2P84101 59 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SELENBP1Q13228 472 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 JMJD6Q6NYC1 403 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 KCNIP4Q6PIL6 250 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CLEC4CQ8WTT0 213 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IKZF4Q9H2S9 585 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 EIF2B1Q14232 305 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 VDAC3Q9Y277 283 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SLC5A6Q9Y289 635 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GPX5O75715 221 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NDUFB6O95139 128 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GDI2P50395 445 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SUCLG1P53597 346 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 EIF2S3LQ2VIR3 472 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NIPSNAP3BQ9BS92 247 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CD3GP09693 182 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TLE2Q04725 743 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PLA2G7Q13093 441 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 RNF111Q6ZNA4 994 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IGHA2P01877 340 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ALDOBP05062 364 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ISG15P05161 165 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ACHEP22303 614 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR12D2P58182 307 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OPCMLQ14982 345 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SLC16A14Q7RTX9 510 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM203Q969S6 136 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MBOAT4Q96T53 435 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GP6Q9HCN6 339 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM242Q9NWH2 141 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ADAMTS7Q9UKP4 1686 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 UPK1AO00322 258 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MAZP56270 477 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PFDN5Q99471 154 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR52D1Q9H346 318 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ERFP50548 548 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 MECP2P51608 486 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ATXN1P54253 815 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF267Q14586 743 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR5M9Q8NGP3 310 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 KLHDC7BQ96G42 594 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 THAP10Q9P2Z0 257 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LHX6Q9UPM6 363 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A10PA6NDY2 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A18PA6NE21 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A16PA6NEW6 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A20PA6NIJ5 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A8PA6NJQ4 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A7PA6NKC0 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A22PA8MWA6 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A12PA8MX19 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A5PA8MXJ8 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A23PA8MXZ1 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A15PP0C7V4 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A13PP0C7W8 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A14PP0C7W9 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM90A24PP0C7X0 464 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SRSF7Q16629 238 aaKnown RBP eCLIP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SLC35F2Q8IXU6 374 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF683Q8IZ20 524 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LRRC46Q96FV0 321 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 C2orf50Q96LR7 162 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 NSUN5Q96P11 429 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SPANXDQ9BXN6 97 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 V9GYS6 101 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CDS2O95674 445 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR5H8P0DN80 308 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF43P17038 809 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 GSG1Q2KHT4 349 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR11A1Q9GZK7 315 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR10A5Q9H207 317 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR10A2Q9H208 303 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 STARD5Q9NSY2 213 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ANXA7P20073 488 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 MSR1P21757 451 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SLC35A1P78382 337 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PABPC1L2AQ5JQF8 200 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PRAMEF17Q5VTA0 474 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PIN1Q13526 163 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TNFAIP8L2Q6P589 184 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TMPRSS5Q9H3S3 457 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ATF4P18848 351 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR5H2Q8NGV7 314 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 KCNK7Q9Y2U2 307 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 NOVA1P51513 510 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DMKNQ6E0U4 476 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RAB3CQ96E17 227 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LGI3Q8N145 548 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RCBTB1Q8NDN9 531 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CSNK2A3Q8NEV1 391 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR4K17Q8NGC6 315 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PIGKQ92643 395 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 M0R036 132 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SIGLEC6O43699 453 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 EIF2S3P41091 472 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CSNK1A1P48729 337 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms