RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CORINQ9Y5Q5 1042 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 MAGED1Q9Y5V3 778 aaPredicted RBP14.79□□□□□ -0.04
HMGN4-201ENST00000377575 SLC25A15Q9Y619 301 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ABCD4O14678 606 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 CHP2O43745 196 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 TPST2O60704 377 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 CD247P20963 164 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 GRPRP30550 384 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 SELENOPP49908 381 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 GZMMP51124 257 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 CDH11P55287 796 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 CDH12P55289 794 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 FOXG1P55316 489 aaPredicted RBP14.78□□□□□ -0.04
HMGN4-201ENST00000377575 IL1RL1Q01638 556 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 C1DQ13901 141 aaKnown RBP14.78□□□□□ -0.04
HMGN4-201ENST00000377575 PRSS57Q6UWY2 283 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 H1FNTQ75WM6 255 aaPredicted RBP14.78□□□□□ -0.04
HMGN4-201ENST00000377575 CCDC80Q76M96 950 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 KRTAP1-3Q8IUG1 177 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 EPHX4Q8IUS5 362 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 SCAIQ8N9R8 606 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 GPR32P1Q8NGA4 272 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 OR6T1Q8NGN1 323 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 VANGL1Q8TAA9 524 aaPredicted RBP14.78□□□□□ -0.04
HMGN4-201ENST00000377575 IGFBPL1Q8WX77 278 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 RADILQ96JH8 1075 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 OXGR1Q96P68 337 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 ALKBH3Q96Q83 286 aaPredicted RBP14.78□□□□□ -0.04
HMGN4-201ENST00000377575 WFDC6Q9BQY6 131 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 ASPNQ9BXN1 380 aa14.78□□□□□ -0.04
HMGN4-201ENST00000377575 LOC100653049A0A140TA62 436 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 KRT34O76011 436 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 WNT11O96014 354 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 FOSL1P15407 271 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 NQO1P15559 274 aaKnown RBP14.77□□□□□ -0.05
HMGN4-201ENST00000377575 PAX1P15863 534 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 PTAFRP25105 342 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 PTH2RP49190 550 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF83P51522 516 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 CLDN17P56750 224 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 RPS4XP62701 263 aaKnown RBP14.77□□□□□ -0.05
HMGN4-201ENST00000377575 VEZF1Q14119 521 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 NPTX1Q15818 432 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 ENTPD8Q5MY95 495 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 CALHM3Q86XJ0 350 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 LILRB1Q8NHL6 650 aaPredicted RBP14.77□□□□□ -0.05
HMGN4-201ENST00000377575 PROX1Q92786 737 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF317Q96PQ6 595 aaPredicted RBP14.77□□□□□ -0.05
HMGN4-201ENST00000377575 LINC00470Q9BZP3 86 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 SLC17A5Q9NRA2 495 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 FAIMQ9NVQ4 179 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 B3GAT1Q9P2W7 334 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 SEC14L4Q9UDX3 406 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 LAMP3Q9UQV4 416 aa14.77□□□□□ -0.05
HMGN4-201ENST00000377575 HEATR1Q9H583 2144 aaKnown RBP14.77□□□□□ -0.05
HMGN4-201ENST00000377575 ACANP16112 2415 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 A0A1W2PR80 420 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 CPSF4LA6NMK7 179 aaKnown RBP14.76□□□□□ -0.05
HMGN4-201ENST00000377575 FAM220BPB1ANY3 271 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 M0R1B8 84 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 CCDC22O60826 627 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 SLC43A1O75387 559 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 IFNA14P01570 189 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 BGLAPP02818 100 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 SH3BGRP55822 239 aaPredicted RBP14.76□□□□□ -0.05
HMGN4-201ENST00000377575 RIPPLY3P57055 190 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 ARPINQ7Z6K5 226 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 YTHDF3Q7Z739 585 aaKnown RBP14.76□□□□□ -0.05
HMGN4-201ENST00000377575 UEVLDQ8IX04 471 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 KDM8Q8N371 416 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 C10orf53Q8N6V4 93 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 RP9Q8TA86 221 aaKnown RBP14.76□□□□□ -0.05
HMGN4-201ENST00000377575 ADAMTS16Q8TE57 1224 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 SMAP2Q8WU79 429 aaPredicted RBP14.76□□□□□ -0.05
HMGN4-201ENST00000377575 PCDHAC1Q9H158 963 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 OBP2BQ9NPH6 170 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 DLL4Q9NR61 685 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 ARMCX1Q9P291 453 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 BAG5Q9UL15 447 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 AP3M1Q9Y2T2 418 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 MTORP42345 2549 aa14.76□□□□□ -0.05
HMGN4-201ENST00000377575 PLCE1Q9P212 2302 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 LOC102725191A0A1B0GVB3 256 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 TRAPPC13A5PLN9 417 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 SHISA9B4DS77 424 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 MT-ATP6P00846 226 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 CDH2P19022 906 aaPredicted RBP14.75□□□□□ -0.05
HMGN4-201ENST00000377575 PTNP21246 168 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 CBLP22681 906 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 PAX7P23759 505 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 CD40P25942 277 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 PRPS1P60891 318 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 HMBOX1Q6NT76 420 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 DEPDC4Q8N2C3 294 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 WDR31Q8NA23 367 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 OR1K1Q8NGR3 316 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 NEUROG1Q92886 237 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 RCN3Q96D15 328 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 SLC41A3Q96GZ6 507 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 BOD1Q96IK1 185 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms