RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 A0A0G2JND7 137 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 ANGPT2O15123 496 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 IGHV4-31P0DP07 118 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 MRPL19P49406 292 aaKnown RBP16.73■□□□□ 0.27
CBWD3-204ENST00000377349 LGALS3BPQ08380 585 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 CYP51A1Q16850 503 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 NIPAL3Q6P499 406 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 DEPDC4Q8N2C3 294 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 C17orf78Q8N4C9 275 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 CKAP2Q8WWK9 683 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 FAM168AQ92567 244 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 MAGEB18Q96M61 343 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 SPATA5L1Q9BVQ7 753 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 SF3B5Q9BWJ5 86 aaKnown RBP16.73■□□□□ 0.27
CBWD3-204ENST00000377349 RABEP2Q9H5N1 569 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 SELENONQ9NZV5 590 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 CORO2BQ9UQ03 480 aa16.73■□□□□ 0.27
CBWD3-204ENST00000377349 BMP2P12643 396 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ETS2P15036 469 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 PRKAR1BP31321 381 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 SELENOPP49908 381 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ATP4BP51164 291 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 RGS8P57771 180 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-204ENST00000377349 SF3A3Q12874 501 aaKnown RBP eCLIP16.72■□□□□ 0.27
CBWD3-204ENST00000377349 MST1LQ2TV78 715 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 HIKESHIQ53FT3 197 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 DHDDSQ86SQ9 333 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ZIC4Q8N9L1 334 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 TMEM45BQ96B21 275 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 KTI12Q96EK9 354 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ZNF607Q96SK3 696 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 SEC14L4Q9UDX3 406 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 LEF1Q9UJU2 399 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ANGPT4Q9Y264 503 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 ATP23Q9Y6H3 246 aa16.72■□□□□ 0.27
CBWD3-204ENST00000377349 A0A1B0GWA3 101 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 VWC2LB2RUY7 222 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 TMEM229AB2RXF0 380 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ATP6V1G2-DDX39BF2Z307 99 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 TPST1O60507 370 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 PNMTP11086 282 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ZNF16P17020 682 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-204ENST00000377349 HTR2AP28223 471 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 MPGP29372 298 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 EFNA4P52798 201 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 SWI5Q1ZZU3 235 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ALG10BQ5I7T1 473 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ABHD12BQ7Z5M8 362 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-204ENST00000377349 COMTD1Q86VU5 262 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ARMC8Q8IUR7 673 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 POMGNT2Q8NAT1 580 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 SMYD1Q8NB12 490 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 STK35Q8TDR2 534 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 PROX1Q92786 737 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 TRIM33Q9UPN9 1127 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 AMDHD2Q9Y303 409 aa16.71■□□□□ 0.27
CBWD3-204ENST00000377349 ZNF587BE7ETH6 402 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 LGI1O95970 557 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 OPN1SWP03999 348 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 APOBEC3AP31941 199 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 CLDN17P56750 224 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 MTPNP58546 118 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 C1DQ13901 141 aaKnown RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 KRTAP24-1Q3LI83 254 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 CREB3L2Q70SY1 520 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 C10orf53Q8N6V4 93 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 ARIH2OSQ8N7S6 290 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 BOD1Q96IK1 185 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 KCNK17Q96T54 332 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 CPPED1Q9BRF8 314 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 SLC52A3Q9NQ40 469 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 RASD1Q9Y272 281 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 NDUFAF1Q9Y375 327 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 A0A096LPE4 126 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 A0A1W2PPZ6 126 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 PRORSD1PA6NEY8 169 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 SERPINB7O75635 380 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 VAMP5O95183 116 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 F12P00748 615 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 NQO1P15559 274 aaKnown RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 ZNF43P17038 809 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 USF1P22415 310 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-204ENST00000377349 PRPS1P60891 318 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 NFYCQ13952 458 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 HIPK4Q8NE63 616 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 MFSD8Q8NHS3 518 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 SLC38A4Q969I6 547 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 PTDSS2Q9BVG9 487 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 VIPAS39Q9H9C1 493 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 FKRPQ9H9S5 495 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 TMEM27Q9HBJ8 222 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 MOKQ9UQ07 419 aa16.7■□□□□ 0.26
CBWD3-204ENST00000377349 TRBV5-3A0A0A0MS03 114 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 M0R082 166 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 NPIPB7O75200 414 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 WNT11O96014 354 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 CSF3P09919 207 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 IGFBP5P24593 272 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 P2RY4P51582 365 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms