RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SARAFQ96BY9 339 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF845Q96IR2 970 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 GRIP2Q9C0E4 1043 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 NDEL1Q9GZM8 345 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 TAS2R5Q9NYW4 299 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 B3GALT5Q9Y2C3 310 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 GMPPBQ9Y5P6 360 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PRRC2CQ9Y520 2896 aaKnown RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 MCIDASD6RGH6 385 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PLPP3O14495 311 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 BCKDKO14874 412 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CLIC3O95833 236 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CPN1P15169 458 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 KLK2P20151 261 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 ENPP1P22413 925 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PUDPQ08623 228 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 GINS1Q14691 196 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 KRTCAP3Q53RY4 240 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 SLC27A4Q6P1M0 643 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PAQR6Q6TCH4 344 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 OR2T33Q8NG76 320 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 OR5M9Q8NGP3 310 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 ASF1BQ9NVP2 202 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 KLHL13Q9P2N7 655 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ZAR1LA6NP61 321 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF814B7Z6K7 855 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 MS4A18H0YCH9 400 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 SYNGR4O95473 234 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 PPP1R3DO95685 299 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 NOS3P29474 1203 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 GIPRP48546 466 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 SMSP52788 366 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 CTXN1P60606 82 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ADARB1P78563 741 aaKnown RBP11.59□□□□□ -0.55
CBWD3-203ENST00000377344 NFATC3Q12968 1075 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 TOP3AQ13472 1001 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-203ENST00000377344 MS4A18Q3C1V0 323 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF324BQ6AW86 544 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-203ENST00000377344 PM20D2Q8IYS1 436 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ROBO4Q8WZ75 1007 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 TFAP2CQ92754 450 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 KATNB1Q9BVA0 655 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 PRRG4Q9BZD6 226 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 INIPQ9NRY2 104 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-203ENST00000377344 ADAM18Q9Y3Q7 739 aa11.59□□□□□ -0.55
CBWD3-203ENST00000377344 H0YAE9 185 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 SLC16A6O15403 523 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 DNPH1O43598 174 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 RAMP1O60894 148 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 ERVK-25P63136 954 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 CDK5Q00535 292 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 MYBPC1Q00872 1141 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 POU3F1Q03052 451 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PON3Q15166 354 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 SLC35F1Q5T1Q4 408 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PLXDC2Q6UX71 529 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 CASP12Q6UXS9 341 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 DPY19L2P2Q6ZN68 376 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 OR4Q3Q8NH05 313 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 FAM81AQ8TBF8 368 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 WBP1Q96G27 269 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 HRASLS5Q96KN8 279 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 ERMAPQ96PL5 475 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 TUBA1CQ9BQE3 449 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 POLDIP3Q9BY77 421 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 Q9H521 79 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 TVP23BQ9NYZ1 205 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 MCTS1Q9ULC4 181 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 RAB26Q9ULW5 256 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 IER3IP1Q9Y5U9 82 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 A0A1W2PRG6 482 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 OR14I1A6ND48 311 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 SMAD9O15198 467 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 GNAO1P09471 354 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 TSPAN19P0C672 248 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PTGS2P35354 604 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 AGFG1P52594 562 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 MLLT10P55197 1068 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 CDC42P60953 191 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 H3F3AP84243 136 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 KEAP1Q14145 624 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PGGHGQ32M88 737 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 FCRLAQ7L513 359 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 UEVLDQ8IX04 471 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms