RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TPT1P8Q9HAU6 139 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 C12orf10Q9HB07 376 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 KCNK9Q9NPC2 374 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 IGHV4-61A0A0C4DH41 118 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 AKAP8O43823 692 aaKnown RBP20.16■□□□□ 0.82
C9orf47-202ENST00000375850 FZD7O75084 574 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 SLC22A3O75751 556 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 CBR1P16152 277 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 ZNF43P17038 809 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 GIFP27352 417 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 ROR2Q01974 943 aaKnown RBP20.16■□□□□ 0.82
C9orf47-202ENST00000375850 TNFAIP8L3Q5GJ75 292 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 LIPNQ5VXI9 398 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 UGT2A3Q6UWM9 527 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 HPS1Q92902 700 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 ITCHQ96J02 903 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 C19orf24Q9BVV8 132 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 THAP1Q9NVV9 213 aa20.16■□□□□ 0.82
C9orf47-202ENST00000375850 YLPM1P49750 1951 aaKnown RBP20.15■□□□□ 0.82
C9orf47-202ENST00000375850 FTCDNL1E5RQL4 147 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 OR2T1O43869 369 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 SLC43A1O75387 559 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 UPK3AO75631 287 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 PNMTP11086 282 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 ETFAP13804 333 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 EPHA3P29320 983 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 ARR3P36575 388 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 HHATQ5VTY9 493 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 CLIP4Q8N3C7 705 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 ANKS4BQ8N8V4 417 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 BPESC1Q9GZL8 116 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 RAD21L1Q9H4I0 556 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 WDR55Q9H6Y2 383 aaPredicted RBP20.15■□□□□ 0.82
C9orf47-202ENST00000375850 ZIM2Q9NZV7 527 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 PCDHB14Q9Y5E9 798 aa20.15■□□□□ 0.82
C9orf47-202ENST00000375850 ARFGEF3Q5TH69 2177 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 SLC35F4A4IF30 521 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 TGFAP01135 160 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 PRG2P13727 222 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 NPR2P20594 1047 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 CHN2P52757 468 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 MPP2Q14168 576 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 ZNF311Q5JNZ3 666 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 VHLLQ6RSH7 139 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 C6orf89Q6UWU4 347 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 SERPINA11Q86U17 422 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 GPR137CQ8N3F9 429 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 TMEM19Q96HH6 336 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 OXGR1Q96P68 337 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 PAIP2Q9BPZ3 127 aaKnown RBP20.14■□□□□ 0.81
C9orf47-202ENST00000375850 NELFAQ9H3P2 528 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 BCL2L10Q9HD36 194 aa20.14■□□□□ 0.81
C9orf47-202ENST00000375850 A0A096LPE4 126 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 LOC102725191A0A1B0GVB3 256 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 A0A1W2PPZ6 126 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 NR5A2O00482 541 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 AIM2O14862 343 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 ZNF432O94892 652 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 STAMBPO95630 424 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 CLDN17P56750 224 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 POU3F1Q03052 451 aaPredicted RBP20.13■□□□□ 0.81
C9orf47-202ENST00000375850 LGALS3BPQ08380 585 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 LINGO2Q7L985 606 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 NET1Q7Z628 596 aaPredicted RBP20.13■□□□□ 0.81
C9orf47-202ENST00000375850 PIK3C3Q8NEB9 887 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 SLC25A36Q96CQ1 311 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 SDR39U1Q9NRG7 319 aaPredicted RBP20.13■□□□□ 0.81
C9orf47-202ENST00000375850 SLC6A13Q9NSD5 602 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 RPS6KB2Q9UBS0 482 aa20.13■□□□□ 0.81
C9orf47-202ENST00000375850 TACSTD2P09758 323 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 DAOP14920 347 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 CALCRP30988 508 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 FADDQ13158 208 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 C1DQ13901 141 aaKnown RBP20.12■□□□□ 0.81
C9orf47-202ENST00000375850 CEP85LQ5SZL2 805 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 FAM69AQ5T7M9 428 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 ATG16L1Q676U5 607 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 NXNQ6DKJ4 435 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 BBS10Q8TAM1 723 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 SLC38A4Q969I6 547 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 MAELQ96JY0 434 aaKnown RBP20.12■□□□□ 0.81
C9orf47-202ENST00000375850 DOK1Q99704 481 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 PTDSS2Q9BVG9 487 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 USP22Q9UPT9 525 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 CHST2Q9Y4C5 530 aa20.12■□□□□ 0.81
C9orf47-202ENST00000375850 hCG_2039718K7EN88 272 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 SNNO75324 88 aaPredicted RBP20.11■□□□□ 0.81
C9orf47-202ENST00000375850 PCMT1P22061 227 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 RPS5P46782 204 aaKnown RBP20.11■□□□□ 0.81
C9orf47-202ENST00000375850 ARF1P84077 181 aaKnown RBP20.11■□□□□ 0.81
C9orf47-202ENST00000375850 HGFACQ04756 655 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 EGR4Q05215 589 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 MFSD13AQ14CX5 517 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 RPS26P11Q5JNZ5 115 aaPredicted RBP20.11■□□□□ 0.81
C9orf47-202ENST00000375850 ZNF786Q8N393 782 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 RFLNBQ8N5W9 214 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 LSMEM1Q8N8F7 131 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 ADPRHL1Q8NDY3 354 aa20.11■□□□□ 0.81
C9orf47-202ENST00000375850 DNAJA4Q8WW22 397 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms