RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PRKCAP17252 672 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ACTA2P62736 377 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ACTG2P63267 376 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZNF45Q02386 682 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 LINC01590Q5TEZ4 76 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 C1orf140Q5VVS0 124 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 EML6Q6ZMW3 1958 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 WDFY4Q6ZS81 3184 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 VASH1Q7L8A9 365 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SLC35F2Q8IXU6 374 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SYS1Q8N2H4 156 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TSPAN32Q96QS1 320 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SMURF1Q9HCE7 757 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SNTG1Q9NSN8 517 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MOKQ9UQ07 419 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 B3GALT1Q9Y5Z6 326 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 B4DXG7 233 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 LRRTM2O43300 516 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR2T1O43869 369 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR2J2O76002 312 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CD63P08962 238 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PTGDSP41222 190 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 KRR1Q13601 381 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TRAM1Q15629 374 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 C1QL3Q5VWW1 255 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 POMZP3Q6PJE2 187 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR5J2Q8NH18 312 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 M1APQ8TC57 530 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CHPT1Q8WUD6 406 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZNRF4Q8WWF5 429 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SPACA9Q96E40 222 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RASL10BQ96S79 203 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GALNT9Q9HCQ5 603 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SDHAF3Q9NRP4 125 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TAS2R5Q9NYW4 299 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HS3ST3B1Q9Y662 390 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GABRPO00591 440 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PLPP2O43688 288 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DXOO77932 396 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 AHSA1O95433 338 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IGHEP01854 428 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 F13BP05160 661 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 APOBEC1P41238 236 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HSF2Q03933 536 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RGS21Q2M5E4 152 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CDONQ4KMG0 1287 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MESTQ5EB52 335 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SLC25A53Q5H9E4 307 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DCAF12Q5T6F0 453 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FAM69BQ5VUD6 431 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CCDC190Q86UF4 302 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 C4orf36Q96KX1 117 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SNX18Q96RF0 628 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZPBPQ9BS86 351 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TMED9Q9BVK6 235 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 STRADBQ9C0K7 418 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GALNT8Q9NY28 637 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 KLRF1Q9NZS2 232 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 LOXL2Q9Y4K0 774 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 WIF1Q9Y5W5 379 aa16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SIRT4Q9Y6E7 314 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RGS9O75916 674 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IGHMP01871 453 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CD59P13987 128 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SDC2P34741 201 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MAP2K6P52564 334 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RUNX1T1Q06455 604 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SSX6Q7RTT6 188 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SYT14Q8NB59 555 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR10G3Q8NGC4 313 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR51L1Q8NGJ5 315 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MRPL48Q96GC5 212 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 WDFY2Q96P53 400 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ALG12Q9BV10 488 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RYDENQ9NUL5 291 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PPP4R1LQ9P1A2 415 aa16.28■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TEX51A0A1B0GUA7 166 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FTCDNL1E5RQL4 147 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZNF208O43345 1280 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FOLR3P41439 243 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR12D2P58182 307 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR5M10Q6IEU7 315 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TMEM81Q6P7N7 255 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TMEM91Q6ZNR0 172 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MARCH9Q86YJ5 346 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DCLRE1CQ96SD1 692 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 KCNS3Q9BQ31 491 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 KCNN2Q9H2S1 579 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 METTL7AQ9H8H3 244 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CPNE5Q9HCH3 593 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RPRD1BQ9NQG5 326 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 INIPQ9NRY2 104 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MRPL39Q9NYK5 338 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MED11Q9P086 117 aa16.27■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SLC35F4A4IF30 521 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 E9PI62 339 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 J3QLW9 94 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms