RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GPR45Q9Y5Y3 372 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 A0A096LPI6 279 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 IGHV2OR16-5A0A0B4J2B6 119 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF503-AS2A6NEH8 195 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 RPL36A-HNRNPH2H7BZ11 118 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SDHDO14521 159 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 KRT75O95678 551 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 BCHEP06276 602 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 PNMTP11086 282 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ETFAP13804 333 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 CBR1P16152 277 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 NPR2P20594 1047 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 BGNP21810 368 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 APEX1P27695 318 aaKnown RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 CHN2P52757 468 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 CLDN17P56750 224 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ARF1P84077 181 aaKnown RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 EGR4Q05215 589 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 LRRC74AQ0VAA2 488 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 RIN1Q13671 783 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 MPP2Q14168 576 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SERPINA11Q86U17 422 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 KIRREL3Q8IZU9 778 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF786Q8N393 782 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 MFSD8Q8NHS3 518 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 STK35Q8TDR2 534 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SLC38A5Q8WUX1 472 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 HPS1Q92902 700 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SLC25A36Q96CQ1 311 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF837Q96EG3 531 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SNX18Q96RF0 628 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 CALML5Q9NZT1 146 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 B3GAT1Q9P2W7 334 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 TMEFF2Q9UIK5 374 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-202ENST00000374426 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
CXCL12-202ENST00000374426 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 RFXANKO14593 260 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 TM9SF1O15321 606 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 TCF21O43680 179 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 AHSA1O95433 338 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 ERCC1P07992 297 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 ITGA2P17301 1181 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 CRATP43155 626 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 RPS5P46782 204 aaKnown RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 CRISP3P54108 245 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 CDH15P55291 814 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 STX3Q13277 289 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 LARS2Q15031 903 aaKnown RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 TRIP10Q15642 601 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 ATG16L1Q676U5 607 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 SPATA21Q7Z572 469 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 LINC01356Q8N9X3 169 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 KTI12Q96EK9 354 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 GPR35Q9HC97 309 aa11.92□□□□□ -0.5
CXCL12-202ENST00000374426 SSU72Q9NP77 194 aaKnown RBP11.92□□□□□ -0.5
CXCL12-202ENST00000374426 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 FZD7O75084 574 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 SLC43A1O75387 559 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF43P17038 809 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 EPHA3P29320 983 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 ARR3P36575 388 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
CXCL12-202ENST00000374426 DSTNP60981 165 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 HOXC5Q00444 222 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 BST1Q10588 318 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 NPRL3Q12980 569 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 ADRM1Q16186 407 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 CEACAM16Q2WEN9 425 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 KRT71Q3SY84 523 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 GTDC1Q4AE62 458 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 MDP1Q86V88 176 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 GLB1L3Q8NCI6 653 aaPredicted RBP11.91□□□□□ -0.5
CXCL12-202ENST00000374426 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 CKAP2Q8WWK9 683 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 VPS33AQ96AX1 596 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 ZBTB18Q99592 522 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 SPATA9Q9BWV2 254 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 WDR55Q9H6Y2 383 aaPredicted RBP11.91□□□□□ -0.5
CXCL12-202ENST00000374426 TPT1P8Q9HAU6 139 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 NOX3Q9HBY0 568 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 CRLF2Q9HC73 371 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 PCDHB14Q9Y5E9 798 aa11.91□□□□□ -0.5
CXCL12-202ENST00000374426 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 VSTM5A8MXK1 200 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 RGS16O15492 202 aaPredicted RBP11.9□□□□□ -0.5
CXCL12-202ENST00000374426 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.5
CXCL12-202ENST00000374426 SEC14L2O76054 403 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 ADRA2AP08913 450 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms