RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TRIM5Q9C035 493 aa10.28□□□□□ -0.76
HDAC8-204ENST00000373560 LAT2Q9GZY6 243 aa10.28□□□□□ -0.76
HDAC8-204ENST00000373560 HINT3Q9NQE9 182 aaKnown RBP10.28□□□□□ -0.76
HDAC8-204ENST00000373560 TMEM181Q9P2C4 612 aa10.28□□□□□ -0.76
HDAC8-204ENST00000373560 POLR3KQ9Y2Y1 108 aaPredicted RBP10.28□□□□□ -0.76
HDAC8-204ENST00000373560 POLR3HQ9Y535 204 aaPredicted RBP10.28□□□□□ -0.76
HDAC8-204ENST00000373560 FAM159BA6NKW6 160 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 H3BNH8 94 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 AKR7A3O95154 331 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 UBTFL6P0CB48 400 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-204ENST00000373560 ZNF14P17017 642 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-204ENST00000373560 ARR3P36575 388 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 P2RY4P51582 365 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 PAX2Q02962 417 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 GLO1Q04760 184 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 LCP2Q13094 533 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.77
HDAC8-204ENST00000373560 SPIN4Q56A73 249 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 TMEM255AQ5JRV8 349 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 NIPAL3Q6P499 406 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 ABHD12BQ7Z5M8 362 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-204ENST00000373560 RAB1CQ92928 201 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 UPRTQ96BW1 309 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 SLC47A1Q96FL8 570 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 CHMP6Q96FZ7 201 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 EGLN2Q96KS0 407 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 CITED4Q96RK1 184 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 TXNDC16Q9P2K2 825 aa10.27□□□□□ -0.77
HDAC8-204ENST00000373560 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
HDAC8-204ENST00000373560 LCE6AA0A183 80 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 TCRBV9S1A1TA0A576 114 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 TMEM72A0PK05 275 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 HMX2A2RU54 273 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 E7ESA3 106 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 PDPK1O15530 556 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 C2P06681 752 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 MYZAPP0CAP1 466 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 THRBP10828 461 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 ATP6V1C1P21283 382 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 CRABP2P29373 138 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 CAPZA2P47755 286 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 ARL4CP56559 192 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 DOC2BQ14184 412 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 METTL2BQ6P1Q9 378 aaKnown RBP10.26□□□□□ -0.77
HDAC8-204ENST00000373560 GPAT4Q86UL3 456 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 POU5F2Q8N7G0 328 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 GRK7Q8WTQ7 553 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 CCL17Q92583 94 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 ARL8AQ96BM9 186 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 NMRK1Q9NWW6 199 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 B3GNT2Q9NY97 397 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 STARD9Q9P2P6 4700 aa10.26□□□□□ -0.77
HDAC8-204ENST00000373560 A8MXK9 166 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 TPD52L2O43399 206 aaKnown RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 OTCP00480 354 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 IGHV2-70P01814 119 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 IGHV4-59P01825 116 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 HMGN2P05204 90 aaKnown RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 HSD3B1P14060 373 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 FUT4P22083 530 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 HSD3B2P26439 372 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 SLC6A9P48067 706 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 SLC35A1P78382 337 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 CD69Q07108 199 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 PIGFQ07326 219 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 HFEQ30201 348 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 DEFB121Q5J5C9 76 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 GKAP1Q5VSY0 366 aaPredicted RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 TMEM154Q6P9G4 183 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 EPHX4Q8IUS5 362 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 ZSCAN4Q8NAM6 433 aaPredicted RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 FAM120BQ96EK7 910 aaKnown RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 ZNF317Q96PQ6 595 aaPredicted RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 KCNA7Q96RP8 456 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 OR51B6Q9H340 312 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 PIGUQ9H490 435 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 DUSP22Q9NRW4 184 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 ZNF224Q9NZL3 707 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 ZNF346Q9UL40 294 aaKnown RBP10.25□□□□□ -0.77
HDAC8-204ENST00000373560 RCE1Q9Y256 329 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 NOX1Q9Y5S8 564 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 DSPPQ9NZW4 1301 aa10.25□□□□□ -0.77
HDAC8-204ENST00000373560 F5H0A9 414 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-204ENST00000373560 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 STX16-NPEPL1H3BU86 382 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 STX16O14662 325 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 ULK1O75385 1050 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 ZNF432O94892 652 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 UBOX5O94941 541 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 PAX7P23759 505 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 RYKP34925 604 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 SPRP35270 261 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-204ENST00000373560 APOBEC1P41238 236 aaKnown RBP10.24□□□□□ -0.77
HDAC8-204ENST00000373560 GATA4P43694 442 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 MAPK14Q16539 360 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 FAM83EQ2M2I3 478 aa10.24□□□□□ -0.77
HDAC8-204ENST00000373560 CEACAM16Q2WEN9 425 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms