RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 IER3IP1Q9Y5U9 82 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 V9GY05 133 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF860A6NHJ4 632 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ADAM11O75078 769 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZFPL1O95159 310 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 OR2T7P0C7T2 308 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 PPP3CBP16298 524 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 DEFA5Q01523 94 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 SGCGQ13326 291 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 STK11Q15831 433 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 FAM74A1Q5RGS3 127 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF660Q6AZW8 331 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZAR1Q86SH2 424 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF619Q8N2I2 560 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 SDR16C5Q8N3Y7 309 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 OR2T27Q8NH04 317 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZPLD1Q8TCW7 415 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 PNPLA2Q96AD5 504 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF346Q9UL40 294 aaKnown RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 SLC31A1O15431 190 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 IFNGP01579 166 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 AK4P27144 223 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 FNTBP49356 437 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 POU4F2Q12837 409 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 DEFB134Q4QY38 66 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 YOD1Q5VVQ6 348 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 C11orf88Q6PI97 169 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 RD3Q7Z3Z2 195 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 OR2L13Q8N349 312 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 COX18Q8N8Q8 333 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 OR14C36Q8NHC7 312 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 RGP1Q92546 391 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 MRPS24Q96EL2 167 aaKnown RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF416Q9BWM5 594 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF350Q9GZX5 532 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 MED11Q9P086 117 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 FBXL3Q9UKT7 428 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 UBE2QL1A1L167 161 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF749O43361 778 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 ITGA10O75578 1167 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 DBIP07108 87 aaKnown RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 THBS1P07996 1170 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 DLX5P56178 289 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 TAS2R20P59543 309 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SORDQ00796 357 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 PCGF3Q3KNV8 242 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 FAM74A3Q4VXF1 159 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 OLFML2AQ68BL7 652 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SYS1Q8N2H4 156 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 OR10Z1Q8NGY1 313 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SLC2A12Q8TD20 617 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 HSPA12BQ96MM6 686 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SAV1Q9H4B6 383 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 FLRT3Q9NZU0 649 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 DENND4AQ7Z401 1863 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SNRPGP15A8MWD9 76 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 D6RAR5 112 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 MCIDASD6RGH6 385 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 PRICKLE3O43900 615 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 LDB3O75112 727 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 EML2O95834 649 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SLC6A6P31641 620 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 MAT1AQ00266 395 aaKnown RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 FHL1Q13642 323 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 RUNX3Q13761 415 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 B3GNTL1Q67FW5 361 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 ARHGAP11AQ6P4F7 1023 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 MUC20Q8N307 709 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 BOLLQ8N9W6 283 aaKnown RBP13.56□□□□□ -0.24
COL9A2-202ENST00000372748 STK35Q8TDR2 534 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 TNFAIP8L1Q8WVP5 186 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 SLC38A3Q99624 504 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 PLA2G2FQ9BZM2 168 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 GLS2Q9UI32 602 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 MOKQ9UQ07 419 aa13.56□□□□□ -0.24
COL9A2-202ENST00000372748 A0A1W2PQU0 124 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 OR6C74A6NCV1 312 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 C4orf47A7E2U8 309 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 ACOT7O00154 380 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 ITPKBP27987 946 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 ART1P52961 327 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
COL9A2-202ENST00000372748 PON3Q15166 354 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 OR4K14Q8NGD5 310 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 TRPV4Q9HBA0 871 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 TMEM27Q9HBJ8 222 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms