RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 C9orf135Q5VTT2 229 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 ANKRD16Q6P6B7 361 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 H1FNTQ75WM6 255 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-201ENST00000372235 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 RASSF5Q8WWW0 418 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 RHNO1Q9BSD3 238 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 PTDSS2Q9BVG9 487 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 ATP23Q9Y6H3 246 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 SETD2Q9BYW2 2564 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-201ENST00000372235 MAP1AP78559 2803 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-201ENST00000372235 ARPC4-TTLL3A0A0A6YYG9 625 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 A0A1B0GWA3 101 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 A0A1W2PR80 420 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 VSTM5A8MXK1 200 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 E7EQL1 145 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 RPL36A-HNRNPH2H7BZ11 118 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 FMO6PO60774 539 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 CDH2P19022 906 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-201ENST00000372235 HOXC5Q00444 222 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 EGR4Q05215 589 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 CYP51A1Q16850 503 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 INTS11Q5TA45 600 aaKnown RBP16.54■□□□□ 0.24
TMEM53-201ENST00000372235 DHDDSQ86SQ9 333 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 SNX32Q86XE0 403 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 EPHX4Q8IUS5 362 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 FAM169BQ8N8A8 192 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 SCAIQ8N9R8 606 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 PIK3C3Q8NEB9 887 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 OR1K1Q8NGR3 316 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 KTI12Q96EK9 354 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-201ENST00000372235 ANKRD27Q96NW4 1050 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 SH3GL1Q99961 368 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 ASPNQ9BXN1 380 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 REG4Q9BYZ8 158 aa16.54■□□□□ 0.24
TMEM53-201ENST00000372235 A0A087WUJ7 227 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 H7C417 338 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 EDF1O60869 148 aaKnown RBP16.53■□□□□ 0.24
TMEM53-201ENST00000372235 IGHV4-39P01824 125 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 CRYAAP02489 173 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 CSF3P09919 207 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 SELENOPP49908 381 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 NUDT6P53370 316 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 FOXG1P55316 489 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-201ENST00000372235 DLEU7Q6UYE1 221 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 GPR137CQ8N3F9 429 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 RNF217Q8TC41 542 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 CGREF1Q99674 301 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 CPPED1Q9BRF8 314 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-201ENST00000372235 KATNB1Q9BVA0 655 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 CACNG6Q9BXT2 260 aa16.53■□□□□ 0.24
TMEM53-201ENST00000372235 ROS1P08922 2347 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 A0A0B4J2E0 115 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 A0A1B0GX12 115 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 MFN2O95140 757 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 MT-ATP6P00846 226 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 NQO1P15559 274 aaKnown RBP16.52■□□□□ 0.24
TMEM53-201ENST00000372235 ACVR1BP36896 505 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 CLDN17P56750 224 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 IL1RL1Q01638 556 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 OR1Q1Q15612 314 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 ADRM1Q16186 407 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 TBRG1Q3YBR2 411 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 C11orf71Q6IPW1 123 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 ZNF613Q6PF04 617 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 CLEC2AQ6UVW9 174 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 PATL1Q86TB9 770 aaKnown RBP16.52■□□□□ 0.24
TMEM53-201ENST00000372235 UEVLDQ8IX04 471 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 TAAR8Q969N4 342 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 ALKBH3Q96Q83 286 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-201ENST00000372235 SLC38A2Q96QD8 506 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 TMEM43Q9BTV4 400 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 C1QTNF6Q9BXI9 259 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 B3GAT2Q9NPZ5 323 aa16.52■□□□□ 0.24
TMEM53-201ENST00000372235 RNF223E7ERA6 249 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 M0R082 166 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-201ENST00000372235 HTR2AP28223 471 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 GRPRP30550 384 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 ROR2Q01974 943 aaKnown RBP16.51■□□□□ 0.23
TMEM53-201ENST00000372235 DMTNQ08495 405 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 NFYCQ13952 458 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 CYLC2Q14093 348 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-201ENST00000372235 DNM1P46Q6ZS02 220 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 IL17RDQ8NFM7 739 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 ZNF417Q8TAU3 575 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 BCL2L2Q92843 193 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-201ENST00000372235 LRR1Q96L50 414 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 ZNF587Q96SQ5 575 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-201ENST00000372235 NPHS2Q9NP85 383 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 KLHL14Q9P2G3 628 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 NOX1Q9Y5S8 564 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 PRR14LQ5THK1 2151 aa16.51■□□□□ 0.23
TMEM53-201ENST00000372235 A0A0G2JND7 137 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 TLX2O43763 284 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-201ENST00000372235 SSX4O60224 188 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 TPST1O60507 370 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 ENTPD5O75356 428 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 UPK3AO75631 287 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 PDE5AO76074 875 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms