RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SHISA3A0PJX4 238 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 FOXE1O00358 373 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CLDN9O95484 217 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ACTL6AO96019 429 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 AK1P00568 194 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 EIF4EP06730 217 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ANXA2P07355 339 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 DRD5P21918 477 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 PTPN6P29350 595 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 GMFBP60983 142 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 KLF9Q13886 244 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM244Q5VVB8 128 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 FAM46CQ5VWP2 391 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM215Q68D42 235 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF626Q68DY1 528 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF813Q6ZN06 617 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF551Q7Z340 670 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SERPINA11Q86U17 422 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM200AQ86VY9 491 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 MRPL43Q8N983 215 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 UBAC2Q8NBM4 344 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CPEB3Q8NE35 698 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SMAP2Q8WU79 429 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ASB11Q8WXH4 323 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 MYLIPQ8WY64 445 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CLCC1Q96S66 551 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 GINS4Q9BRT9 223 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TEX101Q9BY14 249 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 MFFQ9GZY8 342 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 LRTM1Q9HBL6 345 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM138Q9NPI0 162 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SEMA3GQ9NS98 782 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 MED17Q9NVC6 651 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ASIC5Q9NY37 505 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF281Q9Y2X9 895 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 PDE4DIPQ5VU43 2346 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 GNG14A0A1W2PPG7 69 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 OR6C76A6NM76 312 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SNRPGP15A8MWD9 76 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 A8MWP6 167 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 EMC8O43402 210 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SLC25A12O75746 678 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 NFATC1O95644 943 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 MT-ND4P03905 459 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CSTBP04080 98 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 WNT1P04628 370 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 C8GP07360 202 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ATP1B2P14415 290 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 EN2P19622 333 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CNR2P34972 360 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 WNT4P56705 351 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SLC26A5P58743 744 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CDK6Q00534 326 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TAP2Q03519 686 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 HGFACQ04756 655 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SNTB2Q13425 540 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CPSF6Q16630 551 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 KIAA1161Q6NSJ0 714 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 NHLRC1Q6VVB1 395 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 B3GLCTQ6Y288 498 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 C1QL4Q86Z23 238 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 VRK3Q8IV63 474 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ARIH2OSQ8N7S6 290 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 FAM98AQ8NCA5 519 aaKnown RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SKA2Q8WVK7 121 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 RGMAQ96B86 450 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 NOL4LQ96MY1 436 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TGM7Q96PF1 710 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 ATG101Q9BSB4 218 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM208Q9BTX3 173 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 PRO1933Q9H354 126 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 PTGES2Q9H7Z7 377 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SERHLQ9NQF3 203 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 SPHK2Q9NRA0 654 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 CTPS2Q9NRF8 586 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 FAM212BQ9NTI7 297 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-203ENST00000372232 UQCC1Q9NVA1 299 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 DENND4CQ5VZ89 1909 aa8.13□□□□□ -1.11
ATG4A-203ENST00000372232 RRP8O43159 456 aaKnown RBP8.12□□□□□ -1.11
ATG4A-203ENST00000372232 SUV39H1O43463 412 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 CREBL2O60519 120 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-203ENST00000372232 MTX2O75431 263 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 PLGP00747 810 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-203ENST00000372232 IL5P05113 134 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 SNRPCP09234 159 aaKnown RBP8.12□□□□□ -1.11
ATG4A-203ENST00000372232 CD3GP09693 182 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 RAB5AP20339 215 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 AVPR2P30518 371 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 GDNFP39905 211 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 SLC6A12P48065 614 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 MMP15P51511 669 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 DLX5P56178 289 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 SOX8P57073 446 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 RAB8AP61006 207 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 VMACQ2NL98 169 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 C3orf36Q3SXR2 165 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 ELFN2Q5R3F8 820 aa8.12□□□□□ -1.11
ATG4A-203ENST00000372232 LY6G5CQ5SRR4 150 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms