RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GABRPO00591 440 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 RNF13O43567 381 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 UTS2O95399 124 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 LALBAP00709 142 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 APEHP13798 732 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 CELP19835 753 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 F8A1P23610 371 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDB3-204ENST00000372066 SDC2P34741 201 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 CD79BP40259 229 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 OR1D4P47884 311 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 ACTA2P62736 377 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 PPP3R1P63098 170 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ACTG2P63267 376 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 IL10RAQ13651 578 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 HLA-DQA1Q5Y7H0 255 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 TIPARPQ7Z3E1 657 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 TMEM99Q8N816 258 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 C17orf47Q8NEP4 570 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ASB15Q8WXK1 588 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 TMEM203Q969S6 136 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ADIPOR1Q96A54 375 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 KATNB1Q9BVA0 655 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 LAT2Q9GZY6 243 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 NXF5Q9H1B4 397 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 MED20Q9H944 212 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ADGRL4Q9HBW9 690 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 QPCTLQ9NXS2 382 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 COPS7AQ9UBW8 275 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 PLEKHB1Q9UF11 243 aaPredicted RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 YARS2Q9Y2Z4 477 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 MAST4O15021 2626 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 GTPBP1O00178 669 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 CASKO14936 926 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 STK17BO94768 372 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 IL12BP29460 328 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 CD97P48960 835 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 EBPQ15125 230 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.81□□□□□ -0.36
LDB3-204ENST00000372066 DEFB109BQ30KR1 87 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 MZT2AQ6P582 158 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 ATG4DQ86TL0 474 aaPredicted RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 OR10H4Q8NGA5 316 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 TSLPQ969D9 159 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 ZNF501Q96CX3 271 aaPredicted RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 TM9SF2Q99805 663 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 HCAR1Q9BXC0 346 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 OR8D2Q9GZM6 311 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 OR51V1Q9H2C8 321 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
LDB3-204ENST00000372066 DHCR7Q9UBM7 475 aaKnown RBP12.81□□□□□ -0.36
LDB3-204ENST00000372066 SDK2Q58EX2 2172 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 FER1L5A0AVI2 2057 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 OR2W5A6NFC9 320 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 IMPA2O14732 288 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 PLPP2O43688 288 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
LDB3-204ENST00000372066 MPDZO75970 2070 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 OR2T7P0C7T2 308 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 FOLR1P15328 257 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 CASRP41180 1078 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 MTNR1BP49286 362 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 ACY1Q03154 408 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 HSF2Q03933 536 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
LDB3-204ENST00000372066 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 IGFBP7Q16270 282 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 XKRXQ6PP77 449 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 METAP1DQ6UB28 335 aaPredicted RBP12.8□□□□□ -0.36
LDB3-204ENST00000372066 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 OR5M3Q8NGP4 307 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 OR2T27Q8NH04 317 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 NEIL3Q8TAT5 605 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 SMPDL3BQ92485 455 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 TGIF2Q9GZN2 237 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 ADAM30Q9UKF2 790 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 HIF3AQ9Y2N7 669 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 V9GYH0 126 aa12.8□□□□□ -0.36
LDB3-204ENST00000372066 EXPH5Q8NEV8 1989 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 CD1AP06126 327 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 TCN2P20062 427 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 GTF2E2P29084 291 aaKnown RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 RPL4P36578 427 aaKnown RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 SLC16A1P53985 500 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 PNLIPRP2P54317 469 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 MXD1Q05195 221 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 CD226Q15762 336 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 RHBDD2Q6NTF9 364 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms