RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 EGFL6Q8IUX8 553 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 GHSRQ92847 366 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 TM4SF18Q96CE8 201 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 RAB3CQ96E17 227 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 DAZAP1Q96EP5 407 aaKnown RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 KIF25Q9UIL4 384 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 MYH7BA7E2Y1 1941 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 HCRTR1O43613 425 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 PDLIM3Q53GG5 364 aaPredicted RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 TMEM59Q9BXS4 323 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 TMEM82A0PJX8 343 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 MCRIP1C9JLW8 97 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 P2RY10O00398 339 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 SHC1P29353 583 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 HNF4GQ14541 408 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 IDO2Q6ZQW0 420 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 LRRC56Q8IYG6 542 aaPredicted RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 SELENOIQ9C0D9 397 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 MRPS28Q9Y2Q9 187 aaKnown RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 TM4SF4P48230 202 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 HOXA1P49639 335 aaPredicted RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 RPS27AP62979 156 aaKnown RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 UBA52P62987 128 aaKnown RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 OCSTAMPQ9BR26 566 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 MS4A8Q9BY19 250 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 TXNL4BQ9NX01 149 aaKnown RBP20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 EMC9Q9Y3B6 208 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC22A23A1A5C7 686 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 KCNK5O95279 499 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 AFF3P51826 1226 aaKnown RBP20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 OLIG3Q7RTU3 272 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 OR56B1Q8NGI3 324 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 NRIP3Q9NQ35 241 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 CYB5BO43169 146 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 PTAFRP25105 342 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 SECTM1Q8WVN6 248 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 OR2M2Q96R28 347 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 GLTPQ9NZD2 209 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 SIT1Q9Y3P8 196 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 A0A0B4J2A0 478 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC35A1P78382 337 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC36A2Q495M3 483 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 TWSG1Q9GZX9 223 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 GLIPR2Q9H4G4 154 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 SHPKQ9UHJ6 478 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 MOKQ9UQ07 419 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 MSTNO14793 375 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 LILRA3Q8N6C8 439 aaPredicted RBP20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 RBMXL1Q96E39 390 aaKnown RBP20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 LCORQ96JN0 433 aaPredicted RBP20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF583Q96ND8 569 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 HRASLSQ9HDD0 168 aa20.52■□□□□ 0.88
TM9SF3-201ENST00000371142 TRAV36DV7A0A075B6V5 113 aa20.52■□□□□ 0.87
TM9SF3-201ENST00000371142 CRYZL1O95825 349 aa20.52■□□□□ 0.87
TM9SF3-201ENST00000371142 MCOLN1Q9GZU1 580 aa20.52■□□□□ 0.87
TM9SF3-201ENST00000371142 PPA2Q9H2U2 334 aa20.52■□□□□ 0.87
TM9SF3-201ENST00000371142 PRKACBP22694 351 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 PRICKLE2Q7Z3G6 844 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 OR4N2Q8NGD1 307 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 UPRTQ96BW1 309 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 CNTNAP3Q9BZ76 1288 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 WDR76Q9H967 626 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 LIN7BQ9HAP6 207 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 TMEM184BQ9Y519 407 aaPredicted RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 FADS1O60427 444 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 CST5P28325 142 aaPredicted RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 GAREM2Q75VX8 874 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 PRR14Q9BWN1 585 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 NT5DC2Q9H857 520 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 MED17Q9NVC6 651 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 LUZP4Q9P127 313 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 RNF212BA8MTL3 300 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 ZNF705GA8MUZ8 300 aaPredicted RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 K7EPK0 472 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 SHEQ5VZ18 495 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 FAM71E2Q8N5Q1 922 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 SEC22AQ96IW7 307 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 ANKRD10Q9NXR5 420 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 FBXL2Q9UKC9 423 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 GPRIN2O60269 458 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 OR2T7P0C7T2 308 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 NFYAP23511 347 aaPredicted RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 GDNFP39905 211 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 RBMS2Q15434 407 aaKnown RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 ADAMTSL4Q6UY14 1074 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 OR11L1Q8NGX0 322 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 OR2T27Q8NH04 317 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 UBTD2Q8WUN7 234 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 CARD18P57730 90 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 RDH10Q8IZV5 341 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 AMDHD1Q96NU7 426 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 NKX3-1Q99801 234 aaPredicted RBP20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 SUCNR1Q9BXA5 334 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 SAMD10Q9BYL1 202 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 MARCH5Q9NX47 278 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 STEAP1Q9UHE8 339 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 PLEKHM1Q9Y4G2 1056 aa20.51■□□□□ 0.87
TM9SF3-201ENST00000371142 TAPBPO15533 448 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms