RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 KIAA1143Q96AT1 154 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-202ENST00000370399 YIPF6Q96EC8 236 aa6.52□□□□□ -1.37
TGFBR3-202ENST00000370399 TP63Q9H3D4 680 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-202ENST00000370399 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
TGFBR3-202ENST00000370399 R4GN57 208 aa6.52□□□□□ -1.37
TGFBR3-202ENST00000370399 POLEQ07864 2286 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 UBE2QL1A1L167 161 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 OR6C70A6NIJ9 312 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MAPK3P27361 379 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 GPR3P46089 330 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MAP2K3P46734 347 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TSPAN5P62079 268 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 RNF4P78317 190 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 RPL18Q07020 188 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ARFRP1Q13795 201 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ZNF181Q2M3W8 571 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 PRTGQ2VWP7 1150 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 SCGB2B2Q4G0G5 96 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TMEM69Q5SWH9 247 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FAM69AQ5T7M9 428 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 C9orf135Q5VTT2 229 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 C1orf140Q5VVS0 124 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 C1QL3Q5VWW1 255 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 NIPAL3Q6P499 406 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TSEN54Q7Z6J9 526 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MORN4Q8NDC4 146 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ABHD4Q8TB40 342 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TM4SF19Q96DZ7 209 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 KTI12Q96EK9 354 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FAM71F1Q96KD3 344 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 SEMA4CQ9C0C4 833 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 WWTR1Q9GZV5 400 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ENKD1Q9H0I2 346 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CDCP1Q9H5V8 836 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ZNF160Q9HCG1 818 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ACOXLQ9NUZ1 547 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MED29Q9NX70 200 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 DNAJB12Q9NXW2 375 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 OSGIN1Q9UJX0 560 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 KCND3Q9UK17 655 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ZNF346Q9UL40 294 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FARSAQ9Y285 508 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 SIGLEC7Q9Y286 467 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CUL9Q8IWT3 2517 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 A6NCN8 305 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ARRDC5A6NEK1 342 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 INMT-MINDY4F8WBC2 141 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 IL1AP01583 271 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CCL4P13236 92 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 GRK5P34947 590 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TGFBR2P37173 567 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 POLR2HP52434 150 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CTBP2P56545 445 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FABP5Q01469 135 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MEP1BQ16820 701 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 C12orf73Q69YU5 71 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 SLC16A12Q6ZSM3 486 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 NRARPQ7Z6K4 114 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 RPS19BP1Q86WX3 136 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TMEM41AQ96HV5 264 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 VSTM2LQ96N03 204 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 ICE1Q9Y2F5 2266 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TRAV36DV7A0A075B6V5 113 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 MEIS3P1A6NDR6 274 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 OR2T7P0C7T2 308 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 RFC3P40938 356 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 BIDP55957 195 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 PITPNAQ00169 270 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CDK5Q00535 292 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 SNTB2Q13425 540 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TOMM34Q15785 309 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 OPN5Q6U736 354 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 CPEB2Q7Z5Q1 589 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 TMED4Q7Z7H5 227 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 C1orf210Q8IVY1 113 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 OR2T27Q8NH04 317 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 PDCD10Q9BUL8 212 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FAIMQ9NVQ4 179 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 FLRT3Q9NZU0 649 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 PRUNE2Q8WUY3 3088 aa6.51□□□□□ -1.37
TGFBR3-202ENST00000370399 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 A0A0B4J2E0 115 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 A0A1B0GX12 115 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 A8MVM7 634 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 DPM1O60762 260 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 WDPCPO95876 746 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 CT45A8P0DMV1 189 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 CT45A9P0DMV2 189 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 SLC2A1P11166 492 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 ZNF28P17035 718 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 DPP4P27487 766 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 EVI2BP34910 448 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 FAUP35544 74 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 EEF1A1P68104 462 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 ACKR1Q16570 336 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 CT45A2Q5DJT8 189 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 LIPNQ5VXI9 398 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 CORO6Q6QEF8 472 aa6.5□□□□□ -1.37
TGFBR3-202ENST00000370399 RAB11FIP2Q7L804 512 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms