RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 AGAP5A6NIR3 686 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 HMGN4O00479 90 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 FAAHO00519 579 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
SSR4-204ENST00000370087 NPHS1O60500 1241 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 PNPP00491 289 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 GKN3PP0CG01 181 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 ADRA2CP18825 462 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 RPS4Y1P22090 263 aaKnown RBP13.22□□□□□ -0.29
SSR4-204ENST00000370087 CLDN8P56748 225 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 MRPL2Q5T653 305 aaKnown RBP13.22□□□□□ -0.29
SSR4-204ENST00000370087 TMEM225Q6GV28 225 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 KDM8Q8N371 416 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 OR51F2Q8NH61 342 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
SSR4-204ENST00000370087 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 ZNF317Q96PQ6 595 aaPredicted RBP13.22□□□□□ -0.29
SSR4-204ENST00000370087 SYT3Q9BQG1 590 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 LINC00470Q9BZP3 86 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 ZNF696Q9H7X3 374 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 CRLF2Q9HC73 371 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 SEC14L4Q9UDX3 406 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 ZDHHC2Q9UIJ5 367 aa13.22□□□□□ -0.29
SSR4-204ENST00000370087 CFAP73A6NFT4 308 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 M0R233 179 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 SYNGR3O43761 229 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 RP2O75695 350 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 ZNF432O94892 652 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 CPSF4O95639 269 aaKnown RBP13.21□□□□□ -0.29
SSR4-204ENST00000370087 AGR2O95994 175 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 TFP02787 698 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 KRT4P19013 534 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 SH3BGRP55822 239 aaPredicted RBP13.21□□□□□ -0.29
SSR4-204ENST00000370087 POU3F1Q03052 451 aaPredicted RBP13.21□□□□□ -0.29
SSR4-204ENST00000370087 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 PRAMEF8Q5VWM4 474 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 PRAMEF7Q5VXH5 474 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 TUBGCP3Q96CW5 907 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 NEURL3Q96EH8 262 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 GPR35Q9HC97 309 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 RLIMQ9NVW2 624 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 FZR1Q9UM11 496 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 CMAHPQ9Y471 501 aa13.21□□□□□ -0.29
SSR4-204ENST00000370087 VWFP04275 2813 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 TRAV20A0A0B4J274 112 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 RPL36A-HNRNPH2H7BZ11 118 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 MYZAPP0CAP1 466 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 ACHEP22303 614 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 UQCRC2P22695 453 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 NR4A1P22736 598 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 PAX7P23759 505 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 CXCR1P25024 350 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 CLDN17P56750 224 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 HPCAP84074 193 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 SCGB2A2Q13296 93 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 MAPK11Q15759 364 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 PHYHD1Q5SRE7 291 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 CMIPQ8IY22 773 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 OR8J2Q8NGG1 315 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 C1QTNF5Q9BXJ0 243 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 MARCOQ9UEW3 520 aaPredicted RBP13.2□□□□□ -0.3
SSR4-204ENST00000370087 LGALS13Q9UHV8 139 aa13.2□□□□□ -0.3
SSR4-204ENST00000370087 FTCDNL1E5RQL4 147 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 NPIPB7O75200 414 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 HLA-HP01893 362 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 NAT2P11245 290 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 PRG2P13727 222 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 ARR3P36575 388 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 LIMS1P48059 325 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 MAP2K6P52564 334 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 UBA52P62987 128 aaKnown RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 SLC9B1Q4ZJI4 515 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 C1orf140Q5VVS0 124 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 RNF130Q86XS8 419 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 RDH5Q92781 318 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 ZNF75AQ96N20 296 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 TRNT1Q96Q11 434 aaKnown RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 SLC35A5Q9BS91 424 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 PTDSS2Q9BVG9 487 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 TAPBPLQ9BX59 468 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
SSR4-204ENST00000370087 ASIC5Q9NY37 505 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 B3GNT2Q9NY97 397 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 SLC17A7Q9P2U7 560 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
SSR4-204ENST00000370087 ARHGAP32A7KAX9 2087 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms