RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CXCR4P61073 352 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 HOXC5Q00444 222 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 NCF4Q15080 339 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 IGFBP7Q16270 282 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 KLHL26Q53HC5 615 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 C6orf141Q5SZD1 244 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 LCN10Q6JVE6 187 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 H1FNTQ75WM6 255 aaPredicted RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 RNF113BQ8IZP6 322 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 FAM71CQ8NEG0 241 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 OR5L2Q8NGL0 311 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 GNPDA2Q8TDQ7 276 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 RNF31Q96EP0 1072 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 EXOSC3Q9NQT5 275 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 NBEAQ8NFP9 2946 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 LOC102723996A0A087X1L8 192 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 A0A0B4J2E0 115 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 A0A1B0GX12 115 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 A0A1W2PQD3 144 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ZAR1LA6NP61 321 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CHP2O43745 196 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 MPZL2O60487 215 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 TSPAN2O60636 221 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 REM1O75628 298 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ANGPTL1O95841 491 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 IGHEP01854 428 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ITIH1P19827 911 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 MMP11P24347 488 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CRHBPP24387 322 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ELK4P28324 431 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 MEOX1P50221 254 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 HLCSP50747 726 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CSNK2BP67870 215 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 TSPAN31Q12999 210 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ATP1A4Q13733 1029 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 BAK1Q16611 211 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 FNDC7Q5VTL7 733 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ISLR2Q6UXK2 745 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 MBOAT2Q6ZWT7 520 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 OR4C3Q8NH37 302 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CNOT9Q92600 299 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 OMA1Q96E52 524 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 HS6ST2Q96MM7 605 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 LMF1Q96S06 567 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 WDR77Q9BQA1 342 aaPredicted RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 IMPAD1Q9NX62 359 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 IGHV3-20A0A0C4DH32 117 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 DPPA5A6NC42 116 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 OR6C70A6NIJ9 312 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 AQP7P3A6NL99 342 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TRIM64CA6NLI5 447 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 SLC1A7O00341 560 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 STK17BO94768 372 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 UBL4AP11441 157 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PRG2P13727 222 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ATP6V1B1P15313 513 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 FPR3P25089 353 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 EPHA2P29317 976 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 RBM34P42696 430 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 ACAA2P42765 397 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 OMPP47874 163 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 GSSP48637 474 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TMED10P49755 219 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 SLC26A5P58743 744 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 COPZ1P61923 177 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 MAD2L1BPQ15013 274 aaPredicted RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 PTGES3Q15185 160 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 MEP1AQ16819 746 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 CTU2Q2VPK5 515 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 ABLIM2Q6H8Q1 611 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ZER1Q7Z7L7 766 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 P3H2Q8IVL5 708 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 NKAIN4Q8IVV8 208 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ENTHD1Q8IYW4 607 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 OR2Y1Q8NGV0 311 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 FAM81AQ8TBF8 368 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TMEM255BQ8WV15 326 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ADOQ96SZ5 270 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PRRG3Q9BZD7 231 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 FAM192AQ9GZU8 254 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 SCN3BQ9NY72 215 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 SELENONQ9NZV5 590 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 RPS6KB2Q9UBS0 482 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PISDQ9UG56 409 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TMEM5Q9Y2B1 443 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PCSK5Q92824 1860 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TRBV11-1A0A0K0K1C0 115 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 H3BN98 237 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 DHHO43323 396 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 BCAS1O75363 584 aaPredicted RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 THY1P04216 161 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 RAB40ALP0C0E4 278 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 EEF1B2P24534 225 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 ETV5P41161 510 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 FOLR3P41439 243 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 SLC6A8P48029 635 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 IDH2P48735 452 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 FOXL2P58012 376 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms