RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 THBS2P35442 1172 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 NR4A2P43354 598 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 GZMKP49863 264 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 POLR2JP52435 117 aaKnown RBP13.93□□□□□ -0.18
CKS1B-202ENST00000368436 SH3BGRP55822 239 aaPredicted RBP13.93□□□□□ -0.18
CKS1B-202ENST00000368436 NAAAQ02083 359 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 EFNB3Q15768 340 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ADIPOQQ15848 244 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF311Q5JNZ3 666 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 MAVSQ7Z434 540 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 KDM8Q8N371 416 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ANKK1Q8NFD2 765 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ALKBH3Q96Q83 286 aaPredicted RBP13.93□□□□□ -0.18
CKS1B-202ENST00000368436 KCNS3Q9BQ31 491 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 MOV10Q9HCE1 1003 aaKnown RBP13.93□□□□□ -0.18
CKS1B-202ENST00000368436 A4GALTQ9NPC4 353 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 LMX1BO60663 402 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 NUDT7P0C024 238 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 CECR9P0C854 216 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 HOXB9P17482 250 aaPredicted RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 ROR2Q01974 943 aaKnown RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 RGNQ15493 299 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 C6orf89Q6UWU4 347 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 OR9I1Q8NGQ6 314 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 GTF2H4Q92759 462 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 SLC25A36Q96CQ1 311 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 KTI12Q96EK9 354 aaPredicted RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 OR52B2Q96RD2 323 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 PIMREGQ9BSJ6 248 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 RSPO3Q9BXY4 272 aaPredicted RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 PAIP1Q9H074 479 aaKnown RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 SHARPINQ9H0F6 387 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 PLK3Q9H4B4 646 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 C12orf10Q9HB07 376 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 MYOZ1Q9NP98 299 aaPredicted RBP13.92□□□□□ -0.18
CKS1B-202ENST00000368436 B3GAT1Q9P2W7 334 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 PCDHB14Q9Y5E9 798 aa13.92□□□□□ -0.18
CKS1B-202ENST00000368436 A0A096LPE4 126 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 A0A1W2PPZ6 126 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 LOC390937A0A1W2PQ73 354 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 CLIC1O00299 241 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 UBDO15205 165 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 OR4A8P0C604 315 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 CBR1P16152 277 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 CALCRP30988 508 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 RPS5P46782 204 aaKnown RBP13.91□□□□□ -0.18
CKS1B-202ENST00000368436 CLDN17P56750 224 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 TUBA1BP68363 451 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 TUBA4AP68366 448 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 HOXC5Q00444 222 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 GGTLC2Q14390 218 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 C6orf10Q5SRN2 563 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 TUBA1AQ71U36 451 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 MIER2Q8N344 545 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 ARIH2OSQ8N7S6 290 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 LSMEM1Q8N8F7 131 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 OR4F15Q8NGB8 312 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 BBS10Q8TAM1 723 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 FOXN4Q96NZ1 517 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 OXGR1Q96P68 337 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 SEC61A2Q9H9S3 476 aa13.91□□□□□ -0.18
CKS1B-202ENST00000368436 IGHV4-61A0A0C4DH41 118 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 LOC102725191A0A1B0GVB3 256 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 OR2T1O43869 369 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 ETS2P15036 469 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF43P17038 809 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 IGFBP5P24593 272 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 PPOXP50336 477 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
CKS1B-202ENST00000368436 HGFACQ04756 655 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 FADDQ13158 208 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 C5orf46Q6UWT4 87 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 SLC46A3Q7Z3Q1 461 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 NUP37Q8NFH4 326 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 MAL2Q969L2 176 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 MSI2Q96DH6 328 aaKnown RBP13.9□□□□□ -0.18
CKS1B-202ENST00000368436 VRK1Q99986 396 aaPredicted RBP13.9□□□□□ -0.18
CKS1B-202ENST00000368436 RAD21L1Q9H4I0 556 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF442Q9H7R0 627 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 SEC14L4Q9UDX3 406 aa13.9□□□□□ -0.18
CKS1B-202ENST00000368436 FBXO9Q9UK97 447 aaPredicted RBP13.9□□□□□ -0.18
CKS1B-202ENST00000368436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.9□□□□□ -0.182e-9■■■■□ 19.6
CKS1B-202ENST00000368436 SLC35F4A4IF30 521 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 SLC43A1O75387 559 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 GTF2E2P29084 291 aaKnown RBP13.89□□□□□ -0.19
CKS1B-202ENST00000368436 PRKAR1BP31321 381 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 MRPL19P49406 292 aaKnown RBP13.89□□□□□ -0.19
CKS1B-202ENST00000368436 IDH3GP51553 393 aaPredicted RBP13.89□□□□□ -0.19
CKS1B-202ENST00000368436 FAM69AQ5T7M9 428 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 FAM166AQ6J272 317 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 SLC2A7Q6PXP3 512 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 VHLLQ6RSH7 139 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 MYPOPQ86VE0 399 aaPredicted RBP13.89□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF540Q8NDQ6 660 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms