RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FMO3P31513 532 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 POLR2HP52434 150 aaKnown RBP10.94□□□□□ -0.66
USF1-203ENST00000368021 FXYD6P3P58550 94 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 SLC35A2P78381 396 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 ACER2Q5QJU3 275 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 TMEM201Q5SNT2 666 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 FCRLBQ6BAA4 426 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 ACSM5Q6NUN0 579 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 SMARCD3Q6STE5 483 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 OAFQ86UD1 273 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 GPALPP1Q8IXQ4 340 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 IQCF1Q8N6M8 205 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 OR2T33Q8NG76 320 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 OR52L1Q8NGH7 329 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 PSMF1Q92530 271 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 SGTBQ96EQ0 304 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 FER1L6-AS2Q96M78 137 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 Q96MT0 163 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 TSSK6Q9BXA6 273 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 DUSP21Q9H596 190 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 CCNB1IP1Q9NPC3 277 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 MED17Q9NVC6 651 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 IGSF10Q6WRI0 2623 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 CACNA1GO43497 2377 aa10.94□□□□□ -0.66
USF1-203ENST00000368021 B4DXG7 233 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 MASP2O00187 686 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 GNB5O14775 395 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 XPNPEP2O43895 674 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 YES1P07947 543 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 RCVRNP35243 200 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 MAP2K6P52564 334 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 CDH15P55291 814 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 EGR4Q05215 589 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 AIMP2Q13155 320 aaKnown RBP10.93□□□□□ -0.66
USF1-203ENST00000368021 SMN1Q16637 294 aaKnown RBP10.93□□□□□ -0.66
USF1-203ENST00000368021 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 RTL4Q6ZR62 310 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SVOPQ8N4V2 548 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 FAM26EQ8N5C1 309 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 IPCEF1Q8WWN9 437 aaPredicted RBP10.93□□□□□ -0.66
USF1-203ENST00000368021 SLC38A2Q96QD8 506 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ANGPTL4Q9BY76 406 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 UBQLN3Q9H347 655 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 CLN6Q9NWW5 311 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 TVP23BQ9NYZ1 205 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 AASSQ9UDR5 926 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 TEKT2Q9UIF3 430 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ZNF337Q9Y3M9 751 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ZNF891A8MT65 544 aaPredicted RBP10.93□□□□□ -0.66
USF1-203ENST00000368021 J3QRK9 145 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 GMFGO60234 142 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SERPINI2O75830 405 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 OR7A10O76100 309 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 HMGN1P05114 100 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 PRKACAP17612 351 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 DDOSTP39656 456 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 FHL1Q13642 323 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SNAPC1Q16533 368 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ZNF74Q16587 644 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 OCLNQ16625 522 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 PGGHGQ32M88 737 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SLC25A53Q5H9E4 307 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 CLEC12AQ5QGZ9 265 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 MEDAGQ5VYS4 303 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SLC22A10Q63ZE4 541 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 OR5M10Q6IEU7 315 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SLC46A3Q7Z3Q1 461 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 LNX2Q8N448 690 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SIRT6Q8N6T7 355 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 FADS6Q8N9I5 356 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 ZNF540Q8NDQ6 660 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 OR13C2Q8NGS9 318 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 EXTL1Q92935 676 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 THOC3Q96J01 351 aaKnown RBP10.93□□□□□ -0.66
USF1-203ENST00000368021 SAMD8Q96LT4 415 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 MED11Q9P086 117 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 BAIAP2Q9UQB8 552 aa10.93□□□□□ -0.66
USF1-203ENST00000368021 SPENQ96T58 3664 aaKnown RBP10.92□□□□□ -0.66
USF1-203ENST00000368021 TRAV27A0A087WT01 109 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 TMED7-TICAM2A0A0A6YYA0 188 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 CLCA1A8K7I4 914 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 M0R129 80 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 CCRL2O00421 344 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 BHLHE40O14503 412 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 PRKYO43930 277 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 FAM20BO75063 409 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 NPIPB7O75200 414 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 CCNKO75909 580 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 SNX4O95219 450 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 HTR1AP08908 422 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 FUT1P19526 365 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 APOBEC1P41238 236 aaKnown RBP10.92□□□□□ -0.66
USF1-203ENST00000368021 PRPS1P60891 318 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 RPS4XP62701 263 aaKnown RBP10.92□□□□□ -0.66
USF1-203ENST00000368021 DEFB109BQ30KR1 87 aa10.92□□□□□ -0.66
USF1-203ENST00000368021 ESCO2Q56NI9 601 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms