RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OR2J2O76002 312 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GRPP07492 148 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ELAVL4P26378 380 aaKnown RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 PRSS3P35030 304 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ARL3P36405 182 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 RPS18P62269 152 aaKnown RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GPR50Q13585 617 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 SLC22A6Q4U2R8 563 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF385BQ569K4 471 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 OR4F15Q8NGB8 312 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 PRR14Q9BWN1 585 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 COL9A1P20849 921 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GLYR1Q49A26 553 aaPredicted RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 FAM69AQ5T7M9 428 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF836Q6ZNA1 936 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ITFG2Q969R8 447 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 C4orf36Q96KX1 117 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 A0A1W2PQ09 198 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 DAPP51397 102 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 LGALS4P56470 323 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ILKQ13418 452 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 C1orf140Q5VVS0 124 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 B3GNT8Q7Z7M8 397 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 EXD3Q8N9H8 876 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM102Q8N9M5 508 aaPredicted RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 OR7G2Q8NG99 324 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ALG12Q9BV10 488 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 FAM234AQ9H0X4 552 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SLC25A18Q9H1K4 315 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 TAS2R8Q9NYW2 309 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 IGHV3-15A0A0B4J1V0 119 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CD14P08571 375 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SERPINA2P20848 420 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 STT3AP46977 705 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM255BQ8WV15 326 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SLC35A4Q96G79 324 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 PRRX2Q99811 253 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 OR51E2Q9H255 320 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CLEC1BQ9P126 229 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ATXN7O15265 892 aaPredicted RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 AKR7A3O95154 331 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 PTHP01270 115 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CRHBPP24387 322 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 EDDM3BP56851 147 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CRMP1Q14194 572 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CNN3Q15417 329 aaKnown RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF691Q5VV52 312 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SAXO2Q658L1 398 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 FAM122AQ96E09 287 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SDF2Q99470 211 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CRLF2Q9HC73 371 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 MAN2C1Q9NTJ4 1040 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 OLAHQ9NV23 265 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 DSCR3O14972 297 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SERPINA5P05154 406 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 YES1P07947 543 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 NID1P14543 1247 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 GPR3P46089 330 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ADARB1P78563 741 aaKnown RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 EMX1Q04741 257 aaPredicted RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 CPEB2Q7Z5Q1 589 aaKnown RBP10.67□□□□□ -0.7
SYNE1-204ENST00000367248 MRI1Q9BV20 369 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SYNPO2LQ9H987 977 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 IGLV3-16A0A075B6K0 115 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ALKBH6Q3KRA9 238 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 S100PBPQ96BU1 408 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 AMBRA1Q9C0C7 1298 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 NDRG3Q9UGV2 375 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 METTL15A6NJ78 407 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 AMY2AP04746 511 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 OR8G3PP0DMU2 310 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SLC1A3P43003 542 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 FOXK2Q01167 660 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF181Q2M3W8 571 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 TCTN1Q2MV58 587 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 DHRS4L2Q6PKH6 230 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 LINC00346Q8IVM7 164 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 APH1AQ96BI3 265 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 NDUFAF4Q9P032 175 aa10.67□□□□□ -0.7
SYNE1-204ENST00000367248 A0A096LPE4 126 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 A0A1W2PPZ6 126 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 FOXD2O60548 495 aaPredicted RBP10.66□□□□□ -0.7
SYNE1-204ENST00000367248 GFRA3O60609 400 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 HEXAP06865 529 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 AKR1C4P17516 323 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 FZD2Q14332 565 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 GRK1Q15835 563 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 NHSL2Q5HYW2 709 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 OR5J2Q8NH18 312 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 GRPEL2Q8TAA5 225 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 SPNS1Q9H2V7 528 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 A0A1W2PNR3 127 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms