RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 EPGNQ6UW88 154 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 C6orf89Q6UWU4 347 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 DNAJA4Q8WW22 397 aaPredicted RBP12.95□□□□□ -0.34
CTSD-202ENST00000367196 SLC25A36Q96CQ1 311 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 PAIP1Q9H074 479 aaKnown RBP12.95□□□□□ -0.34
CTSD-202ENST00000367196 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 COL6A5A8TX70 2615 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 A0A096LNT2 108 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 PRORSD1PA6NEY8 169 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 FTCDNL1E5RQL4 147 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 NDUFS8O00217 210 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
CTSD-202ENST00000367196 PDLIM4P50479 330 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 LRIF1Q5T3J3 769 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 GCNT6Q5T4J0 391 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 SLC2A7Q6PXP3 512 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 NET1Q7Z628 596 aaPredicted RBP12.94□□□□□ -0.34
CTSD-202ENST00000367196 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 CCDC36Q8IYA8 594 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 GPR137CQ8N3F9 429 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 LSMEM1Q8N8F7 131 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 C10orf105Q8TEF2 133 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 MAL2Q969L2 176 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 FBXO17Q96EF6 278 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 EPYCQ99645 322 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 PIMREGQ9BSJ6 248 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 EVA1AQ9H8M9 152 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 CA10Q9NS85 328 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 TMEM160Q9NX00 188 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 LPAR3Q9UBY5 353 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 TESQ9UGI8 421 aaKnown RBP12.94□□□□□ -0.34
CTSD-202ENST00000367196 SLC13A4Q9UKG4 626 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 CHST2Q9Y4C5 530 aa12.94□□□□□ -0.34
CTSD-202ENST00000367196 RTTNQ86VV8 2226 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 TRAV36DV7A0A075B6V5 113 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 B9A039 149 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 FZD7O75084 574 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ERCC1P07992 297 aaPredicted RBP12.93□□□□□ -0.34
CTSD-202ENST00000367196 NUDT7P0C024 238 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 USF1P22415 310 aaPredicted RBP12.93□□□□□ -0.34
CTSD-202ENST00000367196 SERPINF1P36955 418 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 CLDN17P56750 224 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ROR2Q01974 943 aaKnown RBP12.93□□□□□ -0.34
CTSD-202ENST00000367196 EGR4Q05215 589 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 SWI5Q1ZZU3 235 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ALG10BQ5I7T1 473 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 FAM91A1Q658Y4 838 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ULK3Q6PHR2 472 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 DHRS4L2Q6PKH6 230 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ADPRHL1Q8NDY3 354 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 PIK3C3Q8NEB9 887 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 HTRA1Q92743 480 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 SPDL1Q96EA4 605 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ZNF607Q96SK3 696 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 CCDC28BQ9BUN5 200 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 PTDSS2Q9BVG9 487 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
CTSD-202ENST00000367196 CORINQ9Y5Q5 1042 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
CTSD-202ENST00000367196 EVPLLA8MZ36 301 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 NR5A2O00482 541 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 GPRIN2O60269 458 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 UPK3AO75631 287 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 SERPINB7O75635 380 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
CTSD-202ENST00000367196 FAM157CP0CG43 387 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 ARAFP10398 606 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
CTSD-202ENST00000367196 SLC6A2P23975 617 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 CDK6Q00534 326 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 NAAAQ02083 359 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 EFNB3Q15768 340 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 AGBL2Q5U5Z8 902 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 CYB5R2Q6BCY4 276 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 BLOC1S3Q6QNY0 202 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 H1FNTQ75WM6 255 aaPredicted RBP12.92□□□□□ -0.34
CTSD-202ENST00000367196 SNX32Q86XE0 403 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 ZNF540Q8NDQ6 660 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 NFKBIDQ8NI38 313 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
CTSD-202ENST00000367196 KTI12Q96EK9 354 aaPredicted RBP12.92□□□□□ -0.34
CTSD-202ENST00000367196 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 TMEM38AQ9H6F2 299 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 TMEM27Q9HBJ8 222 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 GMEB1Q9Y692 573 aa12.92□□□□□ -0.34
CTSD-202ENST00000367196 A0A096LPE4 126 aa12.91□□□□□ -0.34
CTSD-202ENST00000367196 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
CTSD-202ENST00000367196 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
CTSD-202ENST00000367196 A0A1W2PPZ6 126 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms