RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PPCDCQ96CD2 204 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZG16BQ96DA0 208 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF764Q96H86 408 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 FCRL1Q96LA6 429 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 TSSK3Q96PN8 268 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF416Q9BWM5 594 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ACTRT3Q9BYD9 372 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 NMUR2Q9GZQ4 415 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 MS4A5Q9H3V2 200 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 GSTO2Q9H4Y5 243 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 REEP4Q9H6H4 257 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 CRLF2Q9HC73 371 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 OXSMQ9NWU1 459 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 B3GNT2Q9NY97 397 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 PLEK2Q9NYT0 353 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 SH3BP4Q9P0V3 963 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 MKLN1Q9UL63 735 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 WIPI2Q9Y4P8 454 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMED7-TICAM2A0A0A6YYA0 188 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 LIPT2A6NK58 231 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 SLC22A31A6NKX4 558 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 AQP7P3A6NL99 342 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 TRAF3IP2O43734 574 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 HLA-HP01893 362 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 ENO1P06733 434 aaKnown RBP7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 IGHV4-38-2P0DP08 117 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 CCL8P80075 99 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 ROR2Q01974 943 aaKnown RBP7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 LCP2Q13094 533 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 GPR68Q15743 365 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 OTUD3Q5T2D3 398 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 SAXO2Q658L1 398 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 C11orf87Q6NUJ2 197 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 C16orf87Q6PH81 154 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 C17orf107Q6ZR85 190 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 CREB3L2Q70SY1 520 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 GRINAQ7Z429 371 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 EGFL6Q8IUX8 553 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 LRRC8AQ8IWT6 810 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLEC4FQ8N1N0 589 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZFP28Q8NHY6 868 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMEM234Q8WY98 164 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR7D2Q96RA2 312 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 ERP44Q9BS26 406 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 C1RLQ9NZP8 487 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMEM216Q9P0N5 145 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 OSGIN1Q9UJX0 560 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMED7Q9Y3B3 224 aa7.19□□□□□ -1.26
HMGB1P39-201ENST00000366304 RYR2Q92736 4967 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 EIF1BO60739 113 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 SEC22BO75396 215 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 KRT33AO76009 404 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLPTM1O96005 669 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 C1QCP02747 245 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 LAMP1P11279 417 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF14P17017 642 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 IMPDH1P20839 514 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 GATA3P23771 443 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 GLRXP35754 106 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 IDH2P48735 452 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 CCT3P49368 545 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLK1P49759 484 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 PLTPP55058 493 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 PKNOX1P55347 436 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 RAG2P55895 527 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 SEC61A1P61619 476 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 FUT5Q11128 374 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 TP53BP2Q13625 1128 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 SPRNQ5BIV9 151 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMEM255AQ5JRV8 349 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 PHYHD1Q5SRE7 291 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 TEX35Q5T0J7 233 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 AP1ARQ63HQ0 302 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 OLFML2AQ68BL7 652 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 NIPAL3Q6P499 406 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 GPAT4Q86UL3 456 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 KDM8Q8N371 416 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR7A2PQ8NGA2 310 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR5AK3PQ8NH89 298 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF563Q8TA94 476 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 ADAMTS15Q8TE58 950 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 CNOT9Q92600 299 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 RAB8BQ92930 207 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 POP5Q969H6 163 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 UBE2FQ969M7 185 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 RAB39BQ96DA2 213 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 GPA33Q99795 319 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 SF3B5Q9BWJ5 86 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 RSPO3Q9BXY4 272 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 GPR35Q9HC97 309 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 MED4Q9NPJ6 270 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 DCAF16Q9NXF7 216 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF224Q9NZL3 707 aa7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 PURGQ9UJV8 347 aaKnown RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 SPIN1Q9Y657 262 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P39-201ENST00000366304 IGHV1-69-2A0A0G2JMI3 117 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms