RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 CYP2S1Q96SQ9 504 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 MPHOSPH6Q99547 160 aaKnown RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 DDX50Q9BQ39 737 aaKnown RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 TMEM246Q9BRR3 403 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 NAT9Q9BTE0 207 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 TBCDQ9BTW9 1192 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 CRNKL1Q9BZJ0 848 aaKnown RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 C20orf85Q9H1P6 137 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZDHHC6Q9H6R6 413 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 RANBP3Q9H6Z4 567 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 UBE2ZQ9H832 354 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 VCPKMTQ9H867 229 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 LMAN1LQ9HAT1 526 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 EXOSC4Q9NPD3 245 aaKnown RBP-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 FAM114A2Q9NRY5 505 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 STARD5Q9NSY2 213 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 B3GNT2Q9NY97 397 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 MBD2Q9UBB5 411 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 CLCF1Q9UBD9 225 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 PSORS1C1Q9UIG5 152 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 GPR34Q9UPC5 381 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 C22orf24Q9Y442 160 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 OARD1Q9Y530 152 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 GMPPBQ9Y5P6 360 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 USP16Q9Y5T5 823 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 FKBP7Q9Y680 259 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 THADAQ6YHU6 1953 aa-0.68□□□□□ -2.52
RNU6-54P-201ENST00000365563 RNF213Q63HN8 5207 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 TEP1Q99973 2627 aaKnown RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 A0A087X0M5 115 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 IGHV1OR15-9A0A0B4J2B8 117 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 IGHV1-3A0A0C4DH29 117 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 A0A1B0GX30 115 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 G3V3Q6 166 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 PRAMEF26H0Y7S4 382 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CHEK1O14757 476 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CHST10O43529 356 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OPN1MWP04001 364 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 FYNP06241 537 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 VIMP08670 466 aaKnown RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CSF3P09919 207 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 GKN3PP0CG01 181 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OPN1MW2P0DN77 364 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OPN1MW3P0DN78 364 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 MYBL1P10243 752 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF18P17022 549 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CXCR2P25025 360 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 RFC2P35250 354 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 NUMBP49757 651 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 SGSHP51688 502 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 GEMIN4P57678 1058 aaKnown RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 DCAF7P61962 342 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 IRX3P78415 501 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 BDH1Q02338 343 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 REG3AQ06141 175 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 PRPSAP1Q14558 356 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 LAGE3Q14657 143 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 STXBP2Q15833 593 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 STX1AQ16623 288 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ADPRMQ3LIE5 342 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CRY2Q49AN0 593 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ANKRD20A4Q4UJ75 823 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 HSP90AB4PQ58FF6 505 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 C9orf152Q5JTZ5 239 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ANKRD20A2Q5SQ80 823 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 FAM201AQ5SY85 155 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ANKRD20A1Q5TYW2 823 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ANKRD20A3Q5VUR7 823 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 SCYL2Q6P3W7 929 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 PLBD1Q6P4A8 553 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CASC4Q6P4E1 433 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 TBPL2Q6SJ96 375 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 DPY19L2P2Q6ZN68 376 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 RBPMS2Q6ZRY4 209 aaKnown RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF767PQ75MW2 155 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 GET4Q7L5D6 327 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 GRINAQ7Z429 371 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 LHFPL3Q86UP9 236 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC22A16Q86VW1 577 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 IQCA1Q86XH1 822 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 CDKL3Q8IVW4 592 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 PIANPQ8IYJ0 282 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF101Q8IZC7 436 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 TMEM256Q8N2U0 113 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC25A45Q8N413 288 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OR51G2Q8NGK0 314 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OR5L2Q8NGL0 311 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 UBLCP1Q8WVY7 318 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 HPDLQ96IR7 371 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF488Q96MN9 340 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 OR2V2Q96R30 315 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 RBBP8Q99708 897 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 SPZ1Q9BXG8 430 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 TMEM59Q9BXS4 323 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 DUSP16Q9BY84 665 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 LSG1Q9H089 658 aaKnown RBP-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 DSN1Q9H410 356 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 LRRC19Q9H756 370 aa-0.69□□□□□ -2.52
RNU6-54P-201ENST00000365563 KIR3DX1Q9H7L2 352 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms