RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FGF9P31371 208 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ARRB1P49407 418 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 BCL2A1Q16548 175 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 USP53Q70EK8 1073 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 SLC38A6Q8IZM9 456 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 OR2L8Q8NGY9 312 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 KLRF1Q9NZS2 232 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 TESQ9UGI8 421 aaKnown RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 FITM1A5D6W6 292 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 PPP3CBP16298 524 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF585AQ6P3V2 769 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF283Q8N7M2 679 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 C17orf47Q8NEP4 570 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 EIF5A2Q9GZV4 153 aaKnown RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 CMC2Q9NRP2 79 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF593O00488 134 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 SCGNO76038 276 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 CDK2P24941 298 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 BLKP51451 505 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 CDK5Q00535 292 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 HHEXQ03014 270 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 PLCXD2Q0VAA5 305 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 RASGEF1BQ0VAM2 473 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 USF2Q15853 346 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ING1Q9UK53 422 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-201ENST00000361866 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 H3BML4 177 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 HTR3BO95264 441 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 CSTBP04080 98 aaKnown RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 AMY2BP19961 511 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF793Q6ZN11 406 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 PHB2Q99623 299 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 C6orf106Q9H6K1 298 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 SLC25A19Q9HC21 320 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 WASH6PQ9NQA3 447 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 C20orf141Q9NUB4 165 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 GPN3Q9UHW5 284 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 NID1P14543 1247 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 FOSL2P15408 326 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 NR0B1P51843 470 aaKnown RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 GPR18Q14330 331 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 ST3GAL2Q16842 350 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 Q499Y3 187 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 OR2A1Q8NGT9 310 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 OR6N1Q8NGY5 312 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 LMX1AQ8TE12 382 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 PITHD1Q9GZP4 211 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 BCL2L10Q9HD36 194 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 AGAP14A8MT82 685 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 FBXO24O75426 580 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 CLPPQ16740 277 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 ACKR4Q9NPB9 350 aa12.82□□□□□ -0.36
COL6A1-201ENST00000361866 C14orf166Q9Y224 244 aaKnown RBP12.82□□□□□ -0.36
COL6A1-201ENST00000361866 QSER1Q2KHR3 1735 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TRPM6Q9BX84 2022 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 PTPRZ1P23471 2315 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 ERVH48-1M5A8F1 160 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 CDC42EP2O14613 210 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF208O43345 1280 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 LANCL1O43813 399 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 B3GALNT1O75752 331 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 LDOC1O95751 146 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 WNT1P04628 370 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 POU3F3P20264 500 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 POU3F4P49335 361 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TPMTP51580 245 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 AANATQ16613 207 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 C1orf189Q5VU69 101 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 AWAT2Q6E213 333 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 PTDSS2Q9BVG9 487 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 ICKQ9UPZ9 632 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 EPXP11678 715 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM215Q68D42 235 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM225Q6GV28 225 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 TMUB2Q71RG4 321 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 RHOUQ7L0Q8 258 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 MFSD9Q8NBP5 474 aa12.81□□□□□ -0.36
COL6A1-201ENST00000361866 FAM71F1Q96KD3 344 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-201ENST00000361866 IL20Q9NYY1 176 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms