RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 MEPEQ9NQ76 525 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 NCDNQ9UBB6 729 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SPTA1P02549 2419 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 VSTM2BA6NLU5 285 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 C9J4A7 227 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF136P52737 540 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 TMEM106AQ96A25 262 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF764Q96H86 408 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SLC46A1Q96NT5 459 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ELOVL3Q9HB03 270 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 RBFOX1Q9NWB1 397 aaKnown RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 DHDHQ9UQ10 334 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 CACNA1GO43497 2377 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 A0A0B4J2E0 115 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 A0A1B0GX12 115 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 HTR3EA5X5Y0 456 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 METTL12A8MUP2 240 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 G3V3Y1 287 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SPI1P17947 270 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SNTA1Q13424 505 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SF3A2Q15428 464 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 DPY19L2P2Q6ZN68 376 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SYT13Q7L8C5 426 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 UBQLNLQ8IYU4 475 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 EID2Q8N6I1 236 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 NKX3-1Q99801 234 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 CCDC86Q9H6F5 360 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 INPP5EQ9NRR6 644 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 UGT2A1Q9Y4X1 527 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 CACNG2Q9Y698 323 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 TRAV18A0A075B6X5 111 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 TRBV11-1A0A0K0K1C0 115 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 OR7A10O76100 309 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 IFNA6P05013 189 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 H2BFMP0C1H6 154 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 FAM53BQ14153 422 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SLC25A35Q3KQZ1 300 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 GLYR1Q49A26 553 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 PCOLCE2Q9UKZ9 415 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 MTCL1Q9Y4B5 1905 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF81P51508 661 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 RIDAP52758 137 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
SIRPA-202ENST00000358771 RCE1Q9Y256 329 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 V9GY05 133 aa13.04□□□□□ -0.32
SIRPA-202ENST00000358771 SNRNP200O75643 2136 aaKnown RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 IGHV1OR15-9A0A0B4J2B8 117 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 NOTOA8MTQ0 251 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 SUSD5O60279 629 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 SCRG1O75711 98 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 ZIC2O95409 532 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 ADRA2AP08913 450 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 NUDT1P36639 197 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 MTNR1BP49286 362 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 ART1P52961 327 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 OR1F2PQ96R84 312 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 DVL2O14641 736 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 RBBP9O75884 186 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 GTF2F2P13984 249 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 FNTBP49356 437 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 SGCAQ16586 387 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 PAPD4Q6PIY7 484 aaKnown RBP13.03□□□□□ -0.32
SIRPA-202ENST00000358771 LANCL3Q6ZV70 420 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 SYNPRQ8TBG9 265 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 TXNDC15Q96J42 360 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 MED11Q9P086 117 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 RFPL3O75679 317 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 GPANK1O95872 356 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 CCR6P51684 374 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 CBFBQ13951 182 aa13.03□□□□□ -0.32
SIRPA-202ENST00000358771 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms