RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAM96BQ9Y3D0 163 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 A0A0D9SEW6 157 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 RNF212BA8MTL3 300 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 SOCS6O14544 535 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 LGI1O95970 557 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 OGFOD3Q6PK18 319 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 TPRG1Q6ZUI0 275 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 SPICQ8N5J4 248 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 DCAF4L2Q8NA75 395 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 MARVELD3Q96A59 401 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 TBL1XR1Q9BZK7 514 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 GHRLQ9UBU3 117 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 STRAPQ9Y3F4 350 aaKnown RBP5.66□□□□□ -1.5
VPS13B-203ENST00000358544 M0R143 59 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 TAAR5O14804 337 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 F3P13726 295 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 F2RL1P55085 397 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 C2orf76Q3KRA6 126 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 MANEAQ5SRI9 462 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 FAHD1Q6P587 224 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 OR2W3Q7Z3T1 314 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 IGSF8Q969P0 613 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 NIPSNAP1Q9BPW8 284 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 TUBB1Q9H4B7 451 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 LYRM2Q9NU23 88 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-203ENST00000358544 MUTYHQ9UIF7 546 aa5.66□□□□□ -1.5
VPS13B-203ENST00000358544 ANK1P16157 1881 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 CNOT4O95628 575 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 C6P13671 934 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 HTR2CP28335 458 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 CAMK2DQ13557 499 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TOMM20Q15388 145 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 LRRTM1Q86UE6 522 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PNPLA2Q96AD5 504 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SUSD3Q96L08 255 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 OR7D2Q96RA2 312 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PARP12Q9H0J9 701 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 RHOFQ9HBH0 211 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.65□□□□□ -1.53e-11■■■■■ 41.3
VPS13B-203ENST00000358544 CSAG2Q9Y5P2 127 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 NDUFB2O95178 105 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PTBP3O95758 552 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MMP3P08254 477 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SERPINA2P20848 420 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TPBGQ13641 420 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 OR51T1Q8NGJ9 327 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MITD1Q8WV92 249 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SEC61A2Q9H9S3 476 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 FRS3O43559 492 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 LATO43561 262 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 CA12O43570 354 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SERPINE2P07093 398 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 INHBBP09529 407 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 ACP5P13686 325 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 IL1RNP18510 177 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 RPL23AP62750 156 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SNRPNP63162 240 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 UBXN2BQ14CS0 331 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 UPRTQ96BW1 309 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MS4A4EQ96PG1 132 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 HAPLN2Q9GZV7 340 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 OR52D1Q9H346 318 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 AUNIPQ9H7T9 357 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TBC1D3BA6NDS4 549 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 METTL15P1P0C7V9 234 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MAT1AQ00266 395 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 FABP5Q01469 135 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 GPR162Q16538 588 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 GGTA1PQ4G0N0 100 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PET117Q6UWS5 81 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MDGA2Q7Z553 956 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SULF2Q8IWU5 870 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 OR13C9Q8NGT0 318 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TRMT2BQ96GJ1 504 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 KIRREL1Q96J84 757 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SLC25A21Q9BQT8 299 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 DLL4Q9NR61 685 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 RNF181Q9P0P0 153 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MMP24Q9Y5R2 645 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM212A6NML5 194 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 H7BYZ3 331 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 NFKBIEO00221 500 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 CSTBP04080 98 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 IGFBP1P08833 259 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 MTHFD2P13995 350 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF628Q5EBL2 1059 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 KCTD11Q693B1 232 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TRNP1Q6NT89 227 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PARGQ86W56 976 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF383Q8NA42 475 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 FBXO22Q8NEZ5 403 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 HLA-CQ95604 372 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 RLIMQ9NVW2 624 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TDRD15B5MCY1 1934 aaKnown RBP5.65□□□□□ -1.5
VPS13B-203ENST00000358544 ARFGEF2Q9Y6D5 1785 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 TRAV27A0A087WT01 109 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 ARRDC5A6NEK1 342 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 OR8G3PP0DMU2 310 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 SRPXP78539 464 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms