RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 C2orf42Q9NWW7 574 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 A0A1W2PNV4 684 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 PLRG1O43660 514 aaKnown RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 ADRB3P13945 408 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 BTF3P20290 206 aaKnown RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 TCTAP57738 103 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 MOAP1Q96BY2 351 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 SIRT3Q9NTG7 399 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 PLSCR5A0PG75 271 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 SEC14L6B5MCN3 397 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 ERAL1O75616 437 aaKnown RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 GUCA1AP43080 201 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 MRPS34P82930 218 aaKnown RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 GUK1Q16774 197 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 FRG2Q64ET8 278 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 NOXRED1Q6NXP6 359 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 DTD2Q96FN9 168 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 FRG2BQ96QU4 278 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 ZNF701Q9NV72 531 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 RLIMQ9NVW2 624 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 MGAMO43451 1857 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 HOXC6P09630 235 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 AMY2BP19961 511 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 C6orf120Q7Z4R8 191 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 ACER1Q8TDN7 264 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 NUDT8Q8WV74 236 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 VAMP8Q9BV40 100 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 ULBP1Q9BZM6 244 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 OR5H15A6NDH6 313 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 OR5H1A6NKK0 313 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 RNF212BA8MTL3 300 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 DNASE2O00115 360 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 LRP3O75074 770 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 CYB5R3P00387 301 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 GNRH1P01148 92 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 PRSS3P35030 304 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 PIN1Q13526 163 aaPredicted RBP6.48□□□□□ -1.37
NF1-202ENST00000358273 ARL6IP1Q15041 203 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 EIPR1Q53HC9 387 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 TMEM108Q6UXF1 575 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 CATSPERGQ6ZRH7 1159 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 FJX1Q86VR8 437 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 ACBD7Q8N6N7 88 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 SERTAD4Q9NUC0 356 aa6.48□□□□□ -1.37
NF1-202ENST00000358273 CREBBPQ92793 2442 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 TRAV18A0A075B6X5 111 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 TSPAN11A1L157 253 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 CNIH1O95406 144 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 KNG1P01042 644 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 HTR2CP28335 458 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 HOXC8P31273 242 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ZNF280AP59817 542 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 OR7E24Q6IFN5 339 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 FAHD1Q6P587 224 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 CPXM2Q8N436 756 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 OR13C4Q8NGS5 318 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 SPRYD4Q8WW59 207 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 NIPSNAP1Q9BPW8 284 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 MED31Q9Y3C7 131 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 TIMM13Q9Y5L4 95 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 ONECUT3O60422 494 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 FBXO45P0C2W1 286 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 PMS2P11Q13670 270 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 GAMTQ14353 236 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ZNF684Q5T5D7 378 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 WSCD1Q658N2 575 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 OR13C9Q8NGT0 318 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 GTF3AQ92664 365 aaKnown RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 TRMT61BQ9BVS5 477 aaKnown RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 MARCH11A6NNE9 402 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 CD82P27701 267 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 SNU13P55769 128 aaKnown RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 HERV-K104P61576 105 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 RGL4Q8IZJ4 473 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 DUSP18Q8NEJ0 188 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 APMAPQ9HDC9 416 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ENPP4Q9Y6X5 453 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 TRBV2A0A0J9YWF9 115 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 MATN3O15232 486 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 CTSHP09668 335 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ETFAP13804 333 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 AVPR2P30518 371 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 KDELR2P33947 212 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 PLA1AQ53H76 456 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ASPGQ86U10 573 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 OR52I1Q8NGK6 324 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 BCO2Q9BYV7 579 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 ARNTLO00327 626 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 CLDN5O00501 218 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 PPIAP62937 165 aaKnown RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 FABP5Q01469 135 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 GBX1Q14549 363 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 MPEG1Q2M385 716 aa6.47□□□□□ -1.37
NF1-202ENST00000358273 GLYR1Q49A26 553 aaPredicted RBP6.47□□□□□ -1.37
NF1-202ENST00000358273 VWA2Q5GFL6 755 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms