RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF454Q8N9F8 522 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 SPRYD4Q8WW59 207 aaPredicted RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 HES7Q9BYE0 225 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 TRIM4Q9C037 500 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 GPR52Q9Y2T5 361 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 A0A1W2PPW3 197 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 EPPINO95925 133 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 SRSF6Q13247 344 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 GINS1Q14691 196 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 PLEKHG7Q6ZR37 379 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR52E2Q8NGJ4 325 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OBP2BQ9NPH6 170 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 SLC7A8Q9UHI5 535 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 GLS2Q9UI32 602 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 A0A1W2PRQ8 180 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ARRDC5A6NEK1 342 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 C16orf97H3BN30 126 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 FADS2O95864 444 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 CPN1P15169 458 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 NUDT6P53370 316 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TAS2R43P59537 309 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ACTA2P62736 377 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ACTG2P63267 376 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 DGCR6Q14129 220 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ADRM1Q16186 407 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 C1QL3Q5VWW1 255 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 BICRALQ6AI39 1079 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 NOXO1Q8NFA2 376 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 IL17RDQ8NFM7 739 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR9K2Q8NGE7 335 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 RCE1Q9Y256 329 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 PLSCR5A0PG75 271 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 DAPL1A0PJW8 107 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 AQP7P3A6NL99 342 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 NEURL1O76050 574 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 IL18BPO95998 194 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 CD3EP07766 207 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR8G3PP0DMU2 310 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 GSTT1P30711 240 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 RAD52P43351 418 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 P2RY6Q15077 328 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 IGFL2Q6UWQ7 119 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 PTOV1Q86YD1 416 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 KLHL36Q8N4N3 616 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 SSC4DQ8WTU2 575 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TSEN15Q8WW01 171 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 SNRNP40Q96DI7 357 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 CNBD2Q96M20 576 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 CENPMQ9NSP4 180 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 IER3IP1Q9Y5U9 82 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 GMEB1Q9Y692 573 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 A0A1B0GVI7 797 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ATE1O95260 518 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ANXA2P07355 339 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 ECH1Q13011 328 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TMEM108Q6UXF1 575 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 YIPF7Q8N8F6 280 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR6T1Q8NGN1 323 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR6N2Q8NGY6 317 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 OR4C3Q8NH37 302 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 ZC3HAV1LQ96H79 300 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 PITX2Q99697 317 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 AMBRA1Q9C0C7 1298 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 TNFRSF10DQ9UBN6 386 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
UPF2-202ENST00000357604 FKBP7Q9Y680 259 aa8.28□□□□□ -1.08
UPF2-202ENST00000357604 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 STARP49675 285 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 PPP3R1P63098 170 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 NPRL3Q12980 569 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 NSUN5P2Q63ZY6 315 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 KCTD8Q6ZWB6 473 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 MRGPRGQ86SM5 289 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 ZNF786Q8N393 782 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 FAM26EQ8N5C1 309 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 LSMEM1Q8N8F7 131 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 TMEM255BQ8WV15 326 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 PGAM5Q96HS1 289 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 SAMD8Q96LT4 415 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 OR10A2Q9H208 303 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 OR52D1Q9H346 318 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 TXNIPQ9H3M7 391 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 ZFC3H1O60293 1989 aaKnown RBP8.27□□□□□ -1.09
UPF2-202ENST00000357604 H3BUI4 141 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 ATP6V1G2O95670 118 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 ELF3P78545 371 aaPredicted RBP8.27□□□□□ -1.09
UPF2-202ENST00000357604 TIGD6Q17RP2 521 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 HYAL4Q2M3T9 481 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 SLC35D3Q5M8T2 416 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.09
UPF2-202ENST00000357604 PEG10Q86TG7 708 aaKnown RBP8.27□□□□□ -1.09
UPF2-202ENST00000357604 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms