RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 ENTPD5O75356 428 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 HPRP00739 348 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 CRHP06850 196 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 CHRNB4P30926 498 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 NTF4P34130 210 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 OMPP47874 163 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 SLC16A1P53985 500 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 NUFIP2Q7Z417 695 aaKnown RBP19.71■□□□□ 0.75
SHMT1-203ENST00000354098 SCAIQ8N9R8 606 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 LIPHQ8WWY8 451 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 STARD4Q96DR4 205 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 SFXN3Q9BWM7 321 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 UCK2Q9BZX2 261 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 B3GAT1Q9P2W7 334 aa19.71■□□□□ 0.75
SHMT1-203ENST00000354098 ZNF629Q9UEG4 869 aaPredicted RBP19.71■□□□□ 0.75
SHMT1-203ENST00000354098 IGKV3D-15A0A087WSY6 115 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 GNGT2O14610 69 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 CDC42EP2O14613 210 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 PDK3Q15120 406 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 BTLAQ7Z6A9 289 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 ZER1Q7Z7L7 766 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 TMEM179BQ7Z7N9 219 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 RELL2Q8NC24 303 aaPredicted RBP19.7■□□□□ 0.74
SHMT1-203ENST00000354098 OR9K2Q8NGE7 335 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 GPA33Q99795 319 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 TAS2R5Q9NYW4 299 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 RASD1Q9Y272 281 aa19.7■□□□□ 0.74
SHMT1-203ENST00000354098 BLOC1S5-TXNDC5H3BN57 136 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 OR10H3O60404 316 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 HIST1H2ABP04908 130 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 SAGP10523 405 aaPredicted RBP19.69■□□□□ 0.74
SHMT1-203ENST00000354098 HLA-DOBP13765 273 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 OPRM1P35372 400 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 TMEM201Q5SNT2 666 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 TMPRSS11FQ6ZWK6 438 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 HIST3H2AQ7L7L0 130 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 CDK20Q8IZL9 346 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF808Q8N4W9 903 aaPredicted RBP19.69■□□□□ 0.74
SHMT1-203ENST00000354098 ZIC4Q8N9L1 334 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 ADPRHL1Q8NDY3 354 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 OR9Q2Q8NGE9 314 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 SSC4DQ8WTU2 575 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 ASB5Q8WWX0 329 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 HIST1H2ACQ93077 130 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 SF3B5Q9BWJ5 86 aaKnown RBP19.69■□□□□ 0.74
SHMT1-203ENST00000354098 NTN4Q9HB63 628 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 GP6Q9HCN6 339 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 DNAJB9Q9UBS3 223 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 EMC9Q9Y3B6 208 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 FLVCR1Q9Y5Y0 555 aa19.69■□□□□ 0.74
SHMT1-203ENST00000354098 HTR3EA5X5Y0 456 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF724A8MTY0 619 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 EFCAB9A8MZ26 197 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 DVL2O14641 736 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 CLOCKO15516 846 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 VAMP5O95183 116 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 IL18BPO95998 194 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 ADORA3P0DMS8 318 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 AHCYP23526 432 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 IL1RL1Q01638 556 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 PUDPQ08623 228 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 FHL1Q13642 323 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 XKRXQ6PP77 449 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 NANOGNBQ7Z5D8 188 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 LILRB4Q8NHJ6 448 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 CA5BP1Q8WTZ4 195 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 OXGR1Q96P68 337 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF385AQ96PM9 386 aaKnown RBP19.68■□□□□ 0.74
SHMT1-203ENST00000354098 C12orf49Q9H741 205 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 FAM90A27PA6NNH2 459 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 C11orf98E9PRG8 122 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 HNRNPRO43390 633 aaKnown RBP19.68■□□□□ 0.74
SHMT1-203ENST00000354098 CGAP01215 116 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 EDNRAP25101 427 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 AQP2P41181 271 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 CREB3L2Q70SY1 520 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.68■□□□□ 0.74
SHMT1-203ENST00000354098 EPHX4Q8IUS5 362 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 OR13C2Q8NGS9 318 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 OR51A7Q8NH64 312 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 LRTOMTQ8WZ04 291 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 TMEM5Q9Y2B1 443 aa19.68■□□□□ 0.74
SHMT1-203ENST00000354098 FASNP49327 2511 aaKnown RBP19.67■□□□□ 0.74
SHMT1-203ENST00000354098 TRAV27A0A087WT01 109 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 H3BNX3 289 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 KLF4O43474 513 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 CCNB2O95067 398 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 OR6A2O95222 327 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 AGAP20933 346 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 POU4F3Q15319 338 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 MICAQ29983 383 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF770Q6IQ21 691 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-203ENST00000354098 PGBD2Q6P3X8 592 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 OAFQ86UD1 273 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 OR6K3Q8NGY3 331 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 MOSPD2Q8NHP6 518 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 TNFRSF13CQ96RJ3 184 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 EMC3Q9P0I2 261 aa19.67■□□□□ 0.74
SHMT1-203ENST00000354098 LOC102725191A0A1B0GVB3 256 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 NKX2-6A6NCS4 301 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms