RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 GALTP07902 379 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 PCP4P48539 62 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 UBE2IP63279 158 aaKnown RBP11.77□□□□□ -0.53
COL6A3-203ENST00000353578 NFATC4Q14934 902 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 NRSN1Q8IZ57 195 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-203ENST00000353578 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 CD80P33681 288 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 SIX1Q15475 284 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-203ENST00000353578 TIGITQ495A1 244 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 LAMB2P55268 1798 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 VEGFDO43915 354 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 SYNGR4O95473 234 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 MTHFD2P13995 350 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 IAH1Q2TAA2 248 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-203ENST00000353578 CDHR3Q6ZTQ4 885 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 BPIFCQ8NFQ6 507 aa11.77□□□□□ -0.53
COL6A3-203ENST00000353578 ADAM11O75078 769 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 EEF1DP3Q658K8 133 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FAM3CQ92520 227 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TOMM40LQ969M1 308 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 DEC1Q9P2X7 70 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 M0R1X1 148 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 ADH1BP00325 375 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 ACKR3P25106 362 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CSF2RBP32927 897 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 EVX1P49640 407 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 ZFP41Q8N8Y5 198 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CDRT4Q8N9R6 151 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CPT1CQ8TCG5 803 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 LMX1AQ8TE12 382 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 APODP05090 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FOXB2Q5VYV0 432 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PRSS58Q8IYP2 241 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 LKAAEAR1Q8TD35 194 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TAAR9Q96RI9 348 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 RAB27BO00194 218 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 SAP18O00422 153 aaKnown RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CCSO14618 274 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FHITP49789 147 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 EML3Q32P44 896 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TPGS2Q68CL5 300 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CLEC20AQ6ZU45 233 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 DND1Q8IYX4 353 aaKnown RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 OR51A7Q8NH64 312 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PTP4A1Q93096 173 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PITX2Q99697 317 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 GPR37L1O60883 481 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CT45A6P0DMU7 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CT45A5P0DMU8 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CT45A7P0DMV0 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FABP4P15090 132 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 BCL6P41182 706 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TAS2R45P59539 299 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FBXO48Q5FWF7 155 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CT45A1Q5HYN5 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CT45A3Q8NHU0 189 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TANKQ92844 425 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PITPNC1Q9UKF7 332 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 DDAH2O95865 285 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 HAGHQ16775 308 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 APCDD1Q8J025 514 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 OR4D6Q8NGJ1 314 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 NDRG4Q9ULP0 352 aaKnown RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CNMDO75829 334 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PAPLNO95428 1278 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 SELENBP1Q13228 472 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 LRRC32Q14392 662 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 Q8N9G6 341 aaPredicted RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 GSTO2Q9H4Y5 243 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 OR1A2Q9Y585 309 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 A8MUA0 341 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 DCTN6O00399 190 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 SCO2O43819 266 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CLCNKAP51800 687 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 PLGLB1Q02325 96 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 FCRLAQ7L513 359 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 OR9Q2Q8NGE9 314 aa11.76□□□□□ -0.53
COL6A3-203ENST00000353578 GSX1Q9H4S2 264 aaPredicted RBP11.76□□□□□ -0.53
COL6A3-203ENST00000353578 OSER1Q9NX31 292 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms