RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PNMTP11086 282 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 MAKP20794 623 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 KIAA0319Q5VV43 1072 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 OR2AK2Q8NG84 335 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 UBTD2Q8WUN7 234 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 APH1BQ8WW43 257 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TXNRD2Q9NNW7 524 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 GCM1Q9NP62 436 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 HRASLS2Q9NWW9 162 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF337Q9Y3M9 751 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CPED1A4D0V7 1026 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 FOLR1P15328 257 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 MRPL19P49406 292 aaKnown RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 C19orf57Q0VDD7 668 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 LRRTM3Q86VH5 581 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 OR6T1Q8NGN1 323 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 LKAAEAR1Q8TD35 194 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 SIDT1Q9NXL6 827 aaKnown RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ASIC5Q9NY37 505 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 GPR137BO60478 399 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 FURINP09958 794 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TAS2R30P59541 319 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CDONQ4KMG0 1287 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 C4orf17Q53FE4 359 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 Q6ZRG5 221 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 OVCH1Q7RTY7 1134 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ACOT4Q8N9L9 421 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 LHFPL5Q8TAF8 219 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 FAM3DQ96BQ1 224 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 GPR174Q9BXC1 333 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 KLHL42Q9P2K6 505 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 PNPP00491 289 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 RNH1P13489 461 aaKnown RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TACR3P29371 465 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 RAB28P51157 221 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 SKA3Q8IX90 412 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 RNF113BQ8IZP6 322 aaKnown RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 PDCD1LG2Q9BQ51 273 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 MACROD1Q9BQ69 325 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 OPA3Q9H6K4 179 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 MVB12BQ9H7P6 319 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 AUNIPQ9H7T9 357 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TAPBPO15533 448 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 PMP2P02689 132 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 SBK3P0C264 359 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 FPR3P25089 353 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 SLC6A11P48066 632 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 BLKP51451 505 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 DPY19L4Q7Z388 723 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 RBM45Q8IUH3 476 aaKnown RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 L3MBTL4Q8NA19 623 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 PTGES2Q9H7Z7 377 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 A4GALTQ9NPC4 353 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM269A0A1B0GVZ9 245 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 NPIPA2E9PIF3 369 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 NPIPA3F8WFD2 350 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 H0YIV9 168 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 SLC16A7O60669 478 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 BAP18Q8IXM2 172 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 CSNK1A1LQ8N752 337 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM255BQ8WV15 326 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 WDR89Q96FK6 387 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 TNFRSF13CQ96RJ3 184 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 FBXL12Q9NXK8 326 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 INSL5Q9Y5Q6 135 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 B3GALT4O96024 378 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 JMJD7P0C870 316 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 UQCC3Q6UW78 93 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 NRSN1Q8IZ57 195 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 A0A0B4J203 849 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 KLF8O95600 359 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 GNB3P16520 340 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 THBS2P35442 1172 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 SOX18P35713 384 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 RPS18P62269 152 aaKnown RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 RAB1AP62820 205 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms