RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 PTCHD4Q6ZW05 846 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 SLC35D2Q76EJ3 337 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 GALNT11Q8NCW6 608 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 OR4D11Q8NGI4 311 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 NANOS1Q8WY41 292 aaKnown RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 RFKQ969G6 155 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 INTS12Q96CB8 462 aaKnown RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 SAMD8Q96LT4 415 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ULBP2Q9BZM5 246 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 RTN4RQ9BZR6 473 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CLN6Q9NWW5 311 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 KLHL13Q9P2N7 655 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 KLHL21Q9UJP4 597 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TLN1Q9Y490 2541 aaKnown RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TRAV27A0A087WT01 109 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ARRDC5A6NEK1 342 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 C17orf51A8MQB3 221 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 AGFG2O95081 481 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CAPNS1P04632 268 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ACVR1BP36896 505 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 BLVRAP53004 296 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 UBE2NP61088 152 aaKnown RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TLE1Q04724 770 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ALKBH2Q6NS38 261 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TBPL2Q6SJ96 375 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF227Q86WZ6 799 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 FAM81AQ8TBF8 368 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ZPLD1Q8TCW7 415 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TAAR8Q969N4 342 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF566Q969W8 418 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ARL5BQ96KC2 179 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TNFRSF13CQ96RJ3 184 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 SEC61A2Q9H9S3 476 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TVP23BQ9NYZ1 205 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CLEC4AQ9UMR7 237 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 PDLIM1O00151 329 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 SOCS2O14508 198 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CASKO14936 926 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 IDH3BO43837 385 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CRHP06850 196 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF708P17019 499 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CRISP1P54107 249 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF544Q6NX49 715 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 PGBD2Q6P3X8 592 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 DPY19L2P2Q6ZN68 376 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 TMPRSS11FQ6ZWK6 438 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ADCK1Q86TW2 530 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 C8orf59Q8N0T1 100 aaPredicted RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 CA5BP1Q8WTZ4 195 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 RNF138Q8WVD3 245 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 ADAD1Q96M93 576 aaKnown RBP7.32□□□□□ -1.24
HMGCR-202ENST00000343975 FAM210AQ96ND0 272 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 DGCR6LQ9BY27 220 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 COQ10BQ9H8M1 238 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 LIPGQ9Y5X9 500 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 FAM208BQ5VWN6 2430 aa7.32□□□□□ -1.24
HMGCR-202ENST00000343975 IGHV3-15A0A0B4J1V0 119 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF587BE7ETH6 402 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PIP5K1CO60331 668 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 F13BP05160 661 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 EEF1B2P24534 225 aaKnown RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 CRABP1P29762 137 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 HMGA2P52926 109 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 KRR1Q13601 381 aaKnown RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 IZUMO2Q6UXV1 221 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 C3P1Q6ZMU1 363 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PXKQ7Z7A4 578 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PROKR2Q8NFJ6 384 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 OR2T4Q8NH00 348 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 ZNF775Q96BV0 537 aaPredicted RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 GMPPAQ96IJ6 420 aaPredicted RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 KATNB1Q9BVA0 655 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 SMURF2Q9HAU4 748 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PROK2Q9HC23 129 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 GP6Q9HCN6 339 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 NGBQ9NPG2 151 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 IER3IP1Q9Y5U9 82 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 ZC3H12DA2A288 527 aaKnown RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PPP1R3DO95685 299 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 IGF2P01344 180 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 YES1P07947 543 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PEX2P28328 305 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 BIDP55957 195 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 ERVK-25P63136 954 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 PLP2Q04941 152 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 TAF13Q15543 124 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 LPCAT4Q643R3 524 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 C1orf94Q6P1W5 598 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 FJX1Q86VR8 437 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 POC1BQ8TC44 478 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 TUBA1CQ9BQE3 449 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 C12orf49Q9H741 205 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 ERRFI1Q9UJM3 462 aaPredicted RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 EPG5Q9HCE0 2579 aa7.31□□□□□ -1.24
HMGCR-202ENST00000343975 COL27A1Q8IZC6 1860 aaPredicted RBP7.31□□□□□ -1.24
HMGCR-202ENST00000343975 AQP7P3A6NL99 342 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms