RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 UFSP2Q9NUQ7 469 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DCDC2BA2VCK2 349 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TLE4Q04727 773 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CRMP1Q14194 572 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 GRM7Q14831 915 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR6M1Q8NGM8 313 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR4K15Q8NH41 348 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 YIPF5Q969M3 257 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 FAM83CQ9BQN1 747 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 POLMQ9NP87 494 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 EVA1BQ9NVM1 165 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SCN8AQ9UQD0 1980 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 HMSDA8MTL9 139 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 HNRNPA1P09651 372 aaKnown RBP eCLIP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ID2Q02363 134 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 EMC4Q5J8M3 183 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 HSD11B1LQ7Z5J1 315 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 RBM45Q8IUH3 476 aaKnown RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SKA3Q8IX90 412 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PTGES2Q9H7Z7 377 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PLEKHB1Q9UF11 243 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CYP8B1Q9UNU6 501 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 NYNRINQ9P2P1 1898 aaKnown RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 NINQ8N4C6 2090 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 AGPAT2O15120 278 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 B4GALT2O60909 372 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF776Q68DI1 518 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF620Q6ZNG0 422 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 KDM8Q8N371 416 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 DUSP19Q8WTR2 217 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SMARCD2Q92925 531 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC41A2Q96JW4 573 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 NIPSNAP3BQ9BS92 247 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 RPS10-NUDT3A0A1W2PQS6 291 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 A8MUA0 341 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 RPS10P46783 165 aaKnown RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CTSCP53634 463 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 EPHA5P54756 1037 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CDK5Q00535 292 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 WBP2NLQ6ICG8 309 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CMTM1Q8IZ96 169 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF561Q8N587 486 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 FRMD1Q8N878 549 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 KLK6Q92876 244 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 UBQLN4Q9NRR5 601 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 IL20Q9NYY1 176 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 POLR2AP24928 1970 aaKnown RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 LOC285556D6RIA3 1793 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 KNG1P01042 644 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CPMP14384 443 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CSNK2A1P68400 391 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC14A1Q13336 389 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SSX9Q7RTT3 188 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TRAPPC6BQ86SZ2 158 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SYS1Q8N2H4 156 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CSNK2A3Q8NEV1 391 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 LINC01599Q8WXQ3 324 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 FAM3DQ96BQ1 224 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PRR14Q9BWN1 585 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 IGFLR1Q9H665 355 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SCPEP1Q9HB40 452 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 EFCAB7A8K855 629 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SOCS7O14512 581 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 GLCEO94923 617 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 AIFM1O95831 613 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM201Q5SNT2 666 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR51S1Q8NGJ8 323 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC25A44Q96H78 314 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR2M4Q96R27 311 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PRRG4Q9BZD6 226 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 KLRF1Q9NZS2 232 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 GMEB2Q9UKD1 530 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 INSL6Q9Y581 213 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR6C65A6NJZ3 312 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM88BA6NKF7 163 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 LDB3O75112 727 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CRTAPO75718 401 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SSX2Q16385 188 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PAQR6Q6TCH4 344 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 RTL10Q7L3V2 364 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 MDGA2Q7Z553 956 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ADGRE4PQ86SQ3 457 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CMIPQ8IY22 773 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 FBXL6Q8N531 539 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 MARVELD3Q96A59 401 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 MIB2Q96AX9 1013 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZDHHC12Q96GR4 267 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 GPR137Q96N19 417 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 DZANK1Q9NVP4 752 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 A4GNTQ9UNA3 340 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 A0A0A6YYH2 397 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 A6NJ64 397 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 RPA2P15927 270 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 IDH3GP51553 393 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CLDN12P56749 244 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms