RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 OR5M10Q6IEU7 315 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 LIPHQ8WWY8 451 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 GPX7Q96SL4 187 aaPredicted RBP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 TIMP4Q99727 224 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 ARRDC1-AS1Q9H2J1 176 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 INPP5EQ9NRR6 644 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 HAO2Q9NYQ3 351 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 COMMD3Q9UBI1 195 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 C19orf25Q9UFG5 118 aaPredicted RBP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 POLHQ9Y253 713 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 PCDHGB2Q9Y5G2 931 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 A0A1W2PQ09 198 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 C2orf72A6NCS6 295 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 IMPA2O14732 288 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 TMCC2O75069 709 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 SLC25A12O75746 678 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 NCR1O76036 304 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 F13BP05160 661 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 PPP3R1P63098 170 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 POU4F2Q12837 409 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 SELENBP1Q13228 472 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 GPR50Q13585 617 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 MRPL14Q6P1L8 145 aaKnown RBP16.89■□□□□ 0.29
HOXA9-201ENST00000343483 NANOGNBQ7Z5D8 188 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 NRARPQ7Z6K4 114 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 NPEPL1Q8NDH3 523 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 ZPLD1Q8TCW7 415 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 PMEPA1Q969W9 287 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 TRIM36Q9NQ86 728 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 GPN3Q9UHW5 284 aaPredicted RBP16.89■□□□□ 0.29
HOXA9-201ENST00000343483 FAM186AA6NE01 2351 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 RALGAPA1Q6GYQ0 2036 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 SHISA3A0PJX4 238 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 RGS9O75916 674 aaPredicted RBP16.89■□□□□ 0.29
HOXA9-201ENST00000343483 LDOC1O95751 146 aaPredicted RBP16.89■□□□□ 0.29
HOXA9-201ENST00000343483 HIST1H2ABP04908 130 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 IMPDH2P12268 514 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 SLC26A5P58743 744 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 TAB1Q15750 504 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 COL28A1Q2UY09 1125 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 TMEM205Q6UW68 189 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 TMEM91Q6ZNR0 172 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 HIST3H2AQ7L7L0 130 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 GDPD1Q8N9F7 314 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 OR5L2Q8NGL0 311 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 HIST1H2ACQ93077 130 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 Q96M85 177 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 ULBP3Q9BZM4 244 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 IRF2BPLQ9H1B7 796 aa16.89■□□□□ 0.29
HOXA9-201ENST00000343483 SIRT4Q9Y6E7 314 aaPredicted RBP16.89■□□□□ 0.29
HOXA9-201ENST00000343483 WDFY3Q8IZQ1 3526 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 LINC00854A0A1B0GVQ3 168 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 OR6C68A6NDL8 312 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 TMEM200CA6NKL6 621 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 IDH3BO43837 385 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 KLK3P07288 261 aaPredicted RBP16.88■□□□□ 0.29
HOXA9-201ENST00000343483 GALP22466 123 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 CTXN1P60606 82 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 ACTC1P68032 377 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 ACTA1P68133 377 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 RPL18Q07020 188 aaKnown RBP16.88■□□□□ 0.29
HOXA9-201ENST00000343483 SCN1BQ07699 218 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 PON3Q15166 354 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 PYDC2Q56P42 97 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 C1QL3Q5VWW1 255 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 LEG1Q6P5S2 330 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 IL17RDQ8NFM7 739 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 GPR119Q8TDV5 335 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 MR1Q95460 341 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 ATF6BQ99941 703 aa16.88■□□□□ 0.29
HOXA9-201ENST00000343483 PAIP2BQ9ULR5 123 aaKnown RBP16.88■□□□□ 0.29
HOXA9-201ENST00000343483 C4orf47A7E2U8 309 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 SUSD5O60279 629 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 MT-ND5P03915 603 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 CD14P08571 375 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 UQCRC1P31930 480 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 NAA10P41227 235 aaPredicted RBP16.87■□□□□ 0.29
HOXA9-201ENST00000343483 POLR2HP52434 150 aaKnown RBP16.87■□□□□ 0.29
HOXA9-201ENST00000343483 HCCSP53701 268 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 ZNF85Q03923 595 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 LGALS3BPQ08380 585 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 MADCAM1Q13477 382 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 ISXQ2M1V0 245 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 LCN1P1Q5VSP4 162 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 JAZF1Q86VZ6 243 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 LSM14AQ8ND56 463 aaKnown RBP16.87■□□□□ 0.29
HOXA9-201ENST00000343483 OR6K6Q8NGW6 343 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 RELTQ969Z4 430 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 C4orf36Q96KX1 117 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 CNN2Q99439 309 aaKnown RBP16.87■□□□□ 0.29
HOXA9-201ENST00000343483 TTTY10Q9BZA0 68 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 KCNN2Q9H2S1 579 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 GALNT9Q9HCQ5 603 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 TAS2R10Q9NYW0 307 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 TRAV36DV7A0A075B6V5 113 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 TMED7-TICAM2A0A0A6YYA0 188 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 J3QLW9 94 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 CSF3P09919 207 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 ZNF19P17023 458 aa16.87■□□□□ 0.29
HOXA9-201ENST00000343483 SPI1P17947 270 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms