RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GAS6Q14393 721 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 TPRG1Q6ZUI0 275 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 BAP18Q8IXM2 172 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 RASGEF1AQ8N9B8 481 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 BRI3BPQ8WY22 251 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 C2orf88Q9BSF0 95 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 MED20Q9H944 212 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 RHOFQ9HBH0 211 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 CMC2Q9NRP2 79 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 ZC3H12DA2A288 527 aaKnown RBP17.03■□□□□ 0.32
SMPD1-201ENST00000342245 UNC119BA6NIH7 251 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 SLC16A8O95907 504 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 HLA-GP17693 338 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 CPT2P23786 658 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 GRB14Q14449 540 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 C1QL4Q86Z23 238 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 NUDCD2Q8WVJ2 157 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 FBXO17Q96EF6 278 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 NAA11Q9BSU3 229 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-201ENST00000342245 POFUT1Q9H488 388 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 KCNK12Q9HB15 430 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 CHMP1AQ9HD42 196 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-201ENST00000342245 KPTNQ9Y664 436 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 SFTA3P0C7M3 94 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 F2RL1P55085 397 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 ERV3-1Q14264 604 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 OR51S1Q8NGJ8 323 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 SLAMF9Q96A28 289 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 LRIG1Q96JA1 1093 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 SLITRK2Q9H156 845 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 OR52D1Q9H346 318 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 NOX4Q9NPH5 578 aa17.02■□□□□ 0.32
SMPD1-201ENST00000342245 TRBV2A0A0J9YWF9 115 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 RNASEK-C17orf49H0YIS7 233 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 BHLHE40O14503 412 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 PAPLNO95428 1278 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 IFNA17P01571 189 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 RAB5AP20339 215 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 GABRR2P28476 465 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 S100A2P29034 98 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 NUBP1P53384 320 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 SLC16A1P53985 500 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 TDGQ13569 410 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 CRTC1Q6UUV9 634 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 MMP21Q8N119 569 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 ING5Q8WYH8 240 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 PLD4Q96BZ4 506 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 POTEKPQ9BYX7 375 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 ANKRD10Q9NXR5 420 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 ASF1AQ9Y294 204 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 CBY1Q9Y3M2 126 aa17.02■□□□□ 0.31
SMPD1-201ENST00000342245 METTL21EPA6NDL7 271 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 CHRM4P08173 479 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 NDUFS1P28331 727 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 TLE2Q04725 743 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 RBM39Q14498 530 aaKnown RBP17.01■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF383Q8NA42 475 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 GFI1Q99684 422 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF426Q9BUY5 554 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF230Q9UIE0 474 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM72A0PK05 275 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 RCBTB2O95199 551 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 CD14P08571 375 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 MRPL3P09001 348 aaKnown RBP17.01■□□□□ 0.31
SMPD1-201ENST00000342245 GTF2F2P13984 249 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 CD34P28906 385 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 MAGEB1P43366 347 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 PSEN2P49810 448 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 PRKXP51817 358 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 EPHB3P54753 998 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 STXBP1P61764 594 aaKnown RBP17.01■□□□□ 0.31
SMPD1-201ENST00000342245 LIPNQ5VXI9 398 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 CD180Q99467 661 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 IL21RQ9HBE5 538 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 GDE1Q9NZC3 331 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 CALML5Q9NZT1 146 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 TIMM10BQ9Y5J6 103 aa17.01■□□□□ 0.31
SMPD1-201ENST00000342245 C17orf102A2RUQ5 167 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 RIIAD1A6NNX1 92 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 KIAA0355O15063 1070 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 ADH7P40394 386 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 ALG11Q2TAA5 492 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 ZNF433Q8N7K0 673 aaPredicted RBP17■□□□□ 0.31
SMPD1-201ENST00000342245 PPP1R1CQ8WVI7 109 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 TM4SF18Q96CE8 201 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 PELI1Q96FA3 418 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 SLC41A3Q96GZ6 507 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 HS6ST2Q96MM7 605 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 FAM83CQ9BQN1 747 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 TWSG1Q9GZX9 223 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM231Q9H6L2 316 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 LPAR3Q9UBY5 353 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 ATXN7L1Q9ULK2 861 aaPredicted RBP17■□□□□ 0.31
SMPD1-201ENST00000342245 SLC35A3Q9Y2D2 325 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 WIF1Q9Y5W5 379 aa17■□□□□ 0.31
SMPD1-201ENST00000342245 TEX13DA0A0J9YY54 714 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-201ENST00000342245 IDSB3KWA1 339 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 RHOP08100 348 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms