RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 OR4N5Q8IXE1 308 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 ZNF281Q9Y2X9 895 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 SCN2AQ99250 2005 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 RPN2P04844 631 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 GP1BAP07359 652 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 SOX2P48431 317 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 RAB13P51153 203 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 UBE2IP63279 158 aaKnown RBP18.48■□□□□ 0.55
UBC-201ENST00000339647 ARHGAP11BQ3KRB8 267 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 EIPR1Q53HC9 387 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 HAGHLQ6PII5 290 aaPredicted RBP18.48■□□□□ 0.55
UBC-201ENST00000339647 STAC2Q6ZMT1 411 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.48■□□□□ 0.552e-19■■■■□ 26.3
UBC-201ENST00000339647 PM20D2Q8IYS1 436 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 DND1Q8IYX4 353 aaKnown RBP18.48■□□□□ 0.55
UBC-201ENST00000339647 DVL3Q92997 716 aaPredicted RBP18.48■□□□□ 0.55
UBC-201ENST00000339647 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 ZNF304Q9HCX3 659 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 OR10H1Q9Y4A9 318 aa18.48■□□□□ 0.55
UBC-201ENST00000339647 SNRNP200O75643 2136 aaKnown RBP18.48■□□□□ 0.55
UBC-201ENST00000339647 PRR32B1ATL7 298 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 PRSS44E7EML9 344 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 H0YC42 278 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 H7C417 338 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 SPTBP11277 2137 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 CCR2P41597 374 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 ILF3Q12906 894 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBC-201ENST00000339647 SPHK2Q9NRA0 654 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 MTFP1Q9UDX5 166 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 LHX6Q9UPM6 363 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 VEGFDO43915 354 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 IFNGP01579 166 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 CALCBP10092 127 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 FAUP35544 74 aaKnown RBP18.47■□□□□ 0.55
UBC-201ENST00000339647 HSD17B2P37059 387 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 SNRPNP63162 240 aaKnown RBP18.47■□□□□ 0.55
UBC-201ENST00000339647 SCRN3Q0VDG4 424 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 FHL1Q13642 323 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 OR2L5Q8NG80 312 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 ARRDC3Q96B67 414 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 MS4A4EQ96PG1 132 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 CTSFQ9UBX1 484 aa18.47■□□□□ 0.55
UBC-201ENST00000339647 APOBEC3BQ9UH17 382 aaKnown RBP18.47■□□□□ 0.55
UBC-201ENST00000339647 H3BSH0 61 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 GPRIN2O60269 458 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 MPPED2Q15777 294 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 LY6G6FQ5SQ64 297 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 OR2W3Q7Z3T1 314 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 OR6N1Q8NGY5 312 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 OR8S1Q8NH09 359 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 LGR4Q9BXB1 951 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 CYB5R1Q9UHQ9 305 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.55
UBC-201ENST00000339647 A0A1W2PQY0 241 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 RPP14O95059 124 aaKnown RBP18.46■□□□□ 0.55
UBC-201ENST00000339647 NGFRP08138 427 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 MEOX2P50222 304 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 NTHL1P78549 312 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 TNFRSF17Q02223 184 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 CEBPEQ15744 281 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 DNM1P46Q6ZS02 220 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 TMPRSS12Q86WS5 348 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 PHYHIPQ92561 330 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 SLC19A3Q9BZV2 496 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 EXO5Q9H790 373 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 TCF7L1Q9HCS4 588 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 APMAPQ9HDC9 416 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 ZNF337Q9Y3M9 751 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 IER3IP1Q9Y5U9 82 aa18.46■□□□□ 0.55
UBC-201ENST00000339647 TBC1D3KA0A087X1G2 549 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 A0A1B0GVT2 93 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 TBC1D3BA6NDS4 549 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 TBC1D3FA6NER0 549 aaPredicted RBP18.46■□□□□ 0.54
UBC-201ENST00000339647 LATO43561 262 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 CD1AP06126 327 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 GTF2F2P13984 249 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 LTBQ06643 244 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 MANEAQ5SRI9 462 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 METRNLQ641Q3 311 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 TBC1D3GQ6DHY5 549 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 JMJD6Q6NYC1 403 aaPredicted RBP18.46■□□□□ 0.54
UBC-201ENST00000339647 ARHGAP11AQ6P4F7 1023 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 RAB11FIP2Q7L804 512 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 HCFC1R1Q9NWW0 138 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 ADAM18Q9Y3Q7 739 aa18.46■□□□□ 0.54
UBC-201ENST00000339647 A0A1B0GTQ1 180 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 FAM171A2A8MVW0 826 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 GLAP06280 429 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 ADCYAP1P18509 176 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 SLC6A6P31641 620 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 BTN3A2P78410 334 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 ZNF528Q3MIS6 628 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 POMGNT2Q8NAT1 580 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 CAMKVQ8NCB2 501 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 OR1S2Q8NGQ3 325 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 OR6K6Q8NGW6 343 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 ZPLD1Q8TCW7 415 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 RNF166Q96A37 237 aaPredicted RBP18.45■□□□□ 0.54
UBC-201ENST00000339647 HSPA12BQ96MM6 686 aa18.45■□□□□ 0.54
UBC-201ENST00000339647 TRPV4Q9HBA0 871 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms