RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 TMEM186Q96B77 213 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 CCDC115Q96NT0 180 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 NOX3Q9HBY0 568 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 RLIMQ9NVW2 624 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 HIF1ANQ9NWT6 349 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 BTNL2Q9UIR0 455 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 RCE1Q9Y256 329 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 GRIP1Q9Y3R0 1128 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 CMAHPQ9Y471 501 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 SPEF1Q9Y4P9 236 aa9.92□□□□□ -0.82
CSMD2-202ENST00000338325 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 ZNF503-AS2A6NEH8 195 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 TMEM229AB2RXF0 380 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 E9PBE3 544 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 SYNGR3O43761 229 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 NPIPB7O75200 414 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 TFP02787 698 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 BPGMP07738 259 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 EGR1P18146 543 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 S100A3P33764 101 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 ACAA2P42765 397 aaKnown RBP9.91□□□□□ -0.82
CSMD2-202ENST00000338325 GPR6P46095 362 aaPredicted RBP9.91□□□□□ -0.82
CSMD2-202ENST00000338325 CLDN17P56750 224 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 COPZ1P61923 177 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 LIN52Q52LA3 116 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 ELFN2Q5R3F8 820 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 KRT80Q6KB66 452 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 SHQ1Q6PI26 577 aaKnown RBP9.91□□□□□ -0.82
CSMD2-202ENST00000338325 MDP1Q86V88 176 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 GCDHQ92947 438 aaPredicted RBP9.91□□□□□ -0.82
CSMD2-202ENST00000338325 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 GPR35Q9HC97 309 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 USP22Q9UPT9 525 aa9.91□□□□□ -0.82
CSMD2-202ENST00000338325 CCDC154A6NI56 674 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 FAM157AC9JC47 383 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 FTCDNL1E5RQL4 147 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 M0R233 179 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 SLC43A1O75387 559 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 ZNF432O94892 652 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 AHSA1O95433 338 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 MSMBP08118 114 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 SAGP10523 405 aaPredicted RBP9.9□□□□□ -0.82
CSMD2-202ENST00000338325 PNMTP11086 282 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 ZNF43P17038 809 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 NCF2P19878 526 aaPredicted RBP9.9□□□□□ -0.82
CSMD2-202ENST00000338325 GTF2E2P29084 291 aaKnown RBP9.9□□□□□ -0.82
CSMD2-202ENST00000338325 CAPZA2P47755 286 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 EVX1P49640 407 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 CEACAM16Q2WEN9 425 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 SLC9B1Q4ZJI4 515 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 COX20Q5RI15 118 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 VRK2Q86Y07 508 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 CCDC36Q8IYA8 594 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 KDM8Q8N371 416 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 GPR137CQ8N3F9 429 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 ZNF781Q8N8C0 355 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 OR52P1PQ8NH57 321 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 MFSD8Q8NHS3 518 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 STK35Q8TDR2 534 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 FAM216AQ8WUB2 273 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 MRPL24Q96A35 216 aaKnown RBP9.9□□□□□ -0.82
CSMD2-202ENST00000338325 PANX1Q96RD7 426 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 MRPL37Q9BZE1 423 aaKnown RBP9.9□□□□□ -0.82
CSMD2-202ENST00000338325 MS4A5Q9H3V2 200 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 NARFLQ9H6Q4 476 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 LPAR2Q9HBW0 351 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 REV1Q9UBZ9 1251 aa9.9□□□□□ -0.82
CSMD2-202ENST00000338325 DSPPQ9NZW4 1301 aa9.9□□□□□ -0.83
CSMD2-202ENST00000338325 TRIM77I1YAP6 450 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 KCNAB3O43448 404 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 ITM2AO43736 263 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 RGS9O75916 674 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-202ENST00000338325 MYZAPP0CAP1 466 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 PRG2P13727 222 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 ACHEP22303 614 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 NR4A1P22736 598 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 CDKN2CP42773 168 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 HILS1P60008 231 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 MAPK11Q15759 364 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 RNF220Q5VTB9 566 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 REP15Q6BDI9 236 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 USP43Q70EL4 1123 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 CARM1Q86X55 608 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 LRRC34Q8IZ02 419 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 PIK3C3Q8NEB9 887 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 OR51F2Q8NH61 342 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 PNPT1Q8TCS8 783 aaKnown RBP9.89□□□□□ -0.83
CSMD2-202ENST00000338325 RDH5Q92781 318 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 SLC25A36Q96CQ1 311 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-202ENST00000338325 LRRC37BQ96QE4 947 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 PTDSS2Q9BVG9 487 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 RBM4Q9BWF3 364 aaKnown RBP9.89□□□□□ -0.83
CSMD2-202ENST00000338325 RACGAP1Q9H0H5 632 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 P2RX2Q9UBL9 471 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 LGALS13Q9UHV8 139 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 PCDHB10Q9UN67 800 aa9.89□□□□□ -0.83
CSMD2-202ENST00000338325 ZNF443Q9Y2A4 671 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms