RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ACP1P24666 158 aa8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 EIF2S3P41091 472 aaKnown RBP8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 ENTPD1P49961 510 aa8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 TMEM105Q8N8V8 129 aa8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 TM4SF19Q96DZ7 209 aa8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 IKZF5Q9H5V7 419 aa8.53□□□□□ -1.04
FNDC3B-201ENST00000336824 GOLGB1Q14789 3259 aaKnown RBP8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 PMS2P1A4D2B8 440 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 K7ESF4 209 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 GFRA3O60609 400 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 APH1AQ96BI3 265 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 NIPAL2Q9H841 368 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 TMEM74BQ9NUR3 256 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 CMAHPQ9Y471 501 aa8.52□□□□□ -1.04
FNDC3B-201ENST00000336824 MSL3P1P0C860 447 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 SOX3P41225 446 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ZNF404Q494X3 552 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 PRICKLE2Q7Z3G6 844 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 BRIX1Q8TDN6 353 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 APOBEC4Q8WW27 367 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ALG12Q9BV10 488 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 GPATCH2Q9NW75 528 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 HSF1Q00613 529 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ROR2Q01974 943 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 SLC25A25Q6KCM7 469 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 PFN4Q8NHR9 129 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ACOT12Q8WYK0 555 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 LIN37Q96GY3 246 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 TMEM41AQ96HV5 264 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 LNP1A1A4G5 178 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 SLC16A6O15403 523 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 RPL27P61353 136 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 CNPY1Q3B7I2 92 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 TBPL2Q6SJ96 375 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 PDCD10Q9BUL8 212 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 WDR76Q9H967 626 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 PLSCR5A0PG75 271 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 A6NLC8 198 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 KDM4EB2RXH2 506 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 H3BSH0 61 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 HTR1FP30939 366 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 RGS19P49795 217 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 FOXK2Q01167 660 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 PRKCDQ05655 676 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 CHDHQ8NE62 594 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 OR5D14Q8NGL3 314 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 GABARAPL1Q9H0R8 117 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 GMPR2Q9P2T1 348 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 MAGED1Q9Y5V3 778 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 FAM183AA6NL82 134 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 CYR61O00622 381 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 RAB40ALP0C0E4 278 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 MAML2Q8IZL2 1156 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ZNF417Q8TAU3 575 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ANKRD9Q96BM1 317 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 C10orf90Q96M02 699 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 MMP27Q9H306 513 aa8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-201ENST00000336824 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 LRRTM2O43300 516 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 ZNF791Q3KP31 576 aaPredicted RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 GLYR1Q49A26 553 aaPredicted RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 UBE3DQ7Z6J8 389 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 GALNT16Q8N428 558 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SLC7A13Q8TCU3 470 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 OR2W5A6NFC9 320 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 ALG1L2C9J202 215 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 FUCA1P04066 466 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 BCAP31P51572 246 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SMCO1Q147U7 214 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 THEM4Q5T1C6 240 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 CWF19L1Q69YN2 538 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 ZBTB46Q86UZ6 589 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 OR10G3Q8NGC4 313 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 CPNE4Q96A23 557 aaPredicted RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 CCL27Q9Y4X3 112 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 CACNA1EQ15878 2313 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 IL2RAP01589 272 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 GNG2P59768 71 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 RAB14P61106 215 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SNRPGP62308 76 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SYT14P1Q58G82 188 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 OLIG3Q7RTU3 272 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 UBQLN3Q9H347 655 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 PRAMEF27A3QJZ7 478 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 METTL15A6NJ78 407 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 GYPBP06028 91 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SFTPCP11686 197 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 HNRNPA0Q13151 305 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 CNN3Q15417 329 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 RNASE12Q5GAN4 147 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 C4orf36Q96KX1 117 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 DEFB127Q9H1M4 99 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 PILRAQ9UKJ1 303 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 GRIP1Q9Y3R0 1128 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 M0R082 166 aa8.51□□□□□ -1.05
FNDC3B-201ENST00000336824 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms