RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HIF3AQ9Y2N7 669 aa15.61■□□□□ 0.09
CHGA-202ENST00000334654 RELNP78509 3460 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 TRAV27A0A087WT01 109 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 MBD3L4A6NDZ8 208 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 MBD3L3A6NE82 208 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 UNC119BA6NIH7 251 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 MBD3L5A6NJ08 208 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 EIF4E1BA6NMX2 242 aaKnown RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 SYNGR4O95473 234 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 ADAP00813 363 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 SAGP10523 405 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 ANXA8P13928 327 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 GNLYP22749 145 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 SLC9A3P48764 834 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 ARHGDIAP52565 204 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 ZP4Q12836 540 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 PMS2P3Q13401 168 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 SLC17A1Q14916 467 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 SF3B4Q15427 424 aaKnown RBP eCLIP15.6■□□□□ 0.09
CHGA-202ENST00000334654 OAFQ86UD1 273 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 LRRC75AQ8NAA5 344 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 OR51A7Q8NH64 312 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 MBD3L2Q8NHZ7 208 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 ABHD3Q8WU67 409 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 GTPBP3Q969Y2 492 aaKnown RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 DMRTA2Q96SC8 542 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 SLC29A1Q99808 456 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 TTYH2Q9BSA4 534 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 NAA11Q9BSU3 229 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 RNF122Q9H9V4 155 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 KRCC1Q9NPI7 259 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 KLHL13Q9P2N7 655 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 REV1Q9UBZ9 1251 aa15.6■□□□□ 0.09
CHGA-202ENST00000334654 TMEFF2Q9UIK5 374 aaPredicted RBP15.6■□□□□ 0.09
CHGA-202ENST00000334654 LOC102725191A0A1B0GVB3 256 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 CASQ2O14958 399 aaPredicted RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 AQP2P41181 271 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 NUP107P57740 925 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 PPP2R2BQ00005 443 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 RPL18Q07020 188 aaKnown RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 EIF2S3LQ2VIR3 472 aaKnown RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 ZBED5Q49AG3 693 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 KDM4DQ6B0I6 523 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 KLHL17Q6TDP4 642 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 B3GNT6Q6ZMB0 384 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 KIF18BQ86Y91 864 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 SLC43A2Q8N370 569 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 MOSPD2Q8NHP6 518 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 ZHX1-C8orf76Q96EF9 292 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 OSBPL10Q9BXB5 764 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 SH3BGRL2Q9UJC5 107 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 FREM1Q5H8C1 2179 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 TRGV8A0A0C4DH27 118 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 E9PLN8 166 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 BLOC1S5-TXNDC5H3BN57 136 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 SOCS2O14508 198 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 HIST1H2ABP04908 130 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 IGFBP1P08833 259 aaPredicted RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 GLI4P10075 376 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 HLA-DOBP13765 273 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 GTF2E2P29084 291 aaKnown RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 CEACAM8P31997 349 aaPredicted RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 TIMP3P35625 211 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 SLC16A1P53985 500 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 PUDPQ08623 228 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 PDK3Q15120 406 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 GUSBP1Q15486 140 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 ANKDD1AQ495B1 522 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 TMEM225Q6GV28 225 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 PPP4R4Q6NUP7 873 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 THSD4Q6ZMP0 1018 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 RASSF6Q6ZTQ3 369 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 NCCRP1Q6ZVX7 275 aaPredicted RBP15.59■□□□□ 0.09
CHGA-202ENST00000334654 HIST3H2AQ7L7L0 130 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 NANOGNBQ7Z5D8 188 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 ZIC4Q8N9L1 334 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 HIST1H2ACQ93077 130 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 VKORC1Q9BQB6 163 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 RASD1Q9Y272 281 aa15.59■□□□□ 0.09
CHGA-202ENST00000334654 DIDO1Q9BTC0 2240 aaKnown RBP15.58■□□□□ 0.08
CHGA-202ENST00000334654 IGKV3D-15A0A087WSY6 115 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 A0A1W2PNV4 684 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 VAMP5O95183 116 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 RCBTB2O95199 551 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 ADORA3P0DMS8 318 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 NTF4P34130 210 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 SLC34A1Q06495 639 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 RASGEF1BQ0VAM2 473 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 COX10Q12887 443 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 POU4F3Q15319 338 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 LPCAT4Q643R3 524 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 ZNF620Q6ZNG0 422 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 CBR4Q8N4T8 237 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 ATG16L2Q8NAA4 619 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 NAXEQ8NCW5 288 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 OXGR1Q96P68 337 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 SF3B5Q9BWJ5 86 aaKnown RBP15.58■□□□□ 0.08
CHGA-202ENST00000334654 PRRG4Q9BZD6 226 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 UCK2Q9BZX2 261 aa15.58■□□□□ 0.08
CHGA-202ENST00000334654 BCO1Q9HAY6 547 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms