RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SDHAP31040 664 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 HSD11B2P80365 405 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 CD83Q01151 205 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 CFHR1Q03591 330 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 ZNF684Q5T5D7 378 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 ASB18Q6ZVZ8 466 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 OVCH1Q7RTY7 1134 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 SDR16C5Q8N3Y7 309 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 OR4D9Q8NGE8 314 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 C1orf216Q8TAB5 229 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 PRUNE2Q8WUY3 3088 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
TPM3-206ENST00000330188 KTI12Q96EK9 354 aaPredicted RBP13.26□□□□□ -0.29
TPM3-206ENST00000330188 TSSK2Q96PF2 358 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 GAL3ST4Q96RP7 486 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 LPAR4Q99677 370 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 LAT2Q9GZY6 243 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 TMEM165Q9HC07 324 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 ZNF346Q9UL40 294 aaKnown RBP13.26□□□□□ -0.29
TPM3-206ENST00000330188 PSMD9O00233 223 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 EEF1E1O43324 174 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 GPRIN2O60269 458 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 CPNE3O75131 537 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 TXNDC12O95881 172 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 F13BP05160 661 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 AHCYP23526 432 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 TACR3P29371 465 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 SLC6A1P30531 599 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ZNF117Q03924 483 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ELAVL1Q15717 326 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 CCDC85BQ15834 202 aaPredicted RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 NOXA1Q86UR1 476 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ZNF511Q8NB15 262 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ZNF563Q8TA94 476 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 FOXQ1Q9C009 403 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 NRSN2Q9GZP1 204 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ADAM19Q9H013 955 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 MRTO4Q9UKD2 239 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 AK6Q9Y3D8 172 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 TCRBV16S1A1N1A0A5B0 115 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 FAM172BPA6NC97 362 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ORC5O43913 435 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 CSNK1EP49674 416 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 MRPS15P82914 257 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 ZP2Q05996 745 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 RPL18Q07020 188 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 EBPQ15125 230 aaKnown RBP13.25□□□□□ -0.29
TPM3-206ENST00000330188 HSD17B12Q53GQ0 312 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 PLA1AQ53H76 456 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 C9orf40Q8IXQ3 194 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 SLC7A5P1Q8MH63 180 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 CREB3L1Q96BA8 519 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 C12orf10Q9HB07 376 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 NOX4Q9NPH5 578 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 RXFP3Q9NSD7 469 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 CLEC4AQ9UMR7 237 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 MOKQ9UQ07 419 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
TPM3-206ENST00000330188 ABCA7Q8IZY2 2146 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 CDC14CA4D256 554 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 C17orf51A8MQB3 221 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 PIN1P1O15428 100 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 ARSBP15848 533 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 BTCP35070 178 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 SLC6A8P48029 635 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 ARL4DP49703 201 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 NANOS3P60323 173 aaKnown RBP13.24□□□□□ -0.29
TPM3-206ENST00000330188 VWA2Q5GFL6 755 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 SNAP47Q5SQN1 464 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 NUP54Q7Z3B4 507 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 HAVCR2Q8TDQ0 301 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 PHYHIPQ92561 330 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 TAAR8Q969N4 342 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 ABCG5Q9H222 651 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 BRD7Q9NPI1 651 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 DCTN6O00399 190 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 TSPAN2O60636 221 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 FOLR1P15328 257 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 FBLP22087 321 aaKnown RBP13.24□□□□□ -0.29
TPM3-206ENST00000330188 IL12BP29460 328 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 LCN1P31025 176 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 DCAF7P61962 342 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 CDK10Q15131 360 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 MESTQ5EB52 335 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 HACD4Q5VWC8 232 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 NANOGNBQ7Z5D8 188 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 SLC35F3Q8IY50 421 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 TIGD4Q8IY51 512 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 CARFQ8N187 725 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 D2HGDHQ8N465 521 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 RGP1Q92546 391 aaPredicted RBP13.24□□□□□ -0.29
TPM3-206ENST00000330188 TSPAN32Q96QS1 320 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 UBE2ZQ9H832 354 aaPredicted RBP13.24□□□□□ -0.29
TPM3-206ENST00000330188 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 KLHDC2Q9Y2U9 406 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms