RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SIRT4Q9Y6E7 314 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 ENPP4Q9Y6X5 453 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RNF222A6NCQ9 220 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 RNASEK-C17orf49H0YIS7 233 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 RNF13O43567 381 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 OR10H3O60404 316 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 GLCEO94923 617 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 NDUFB6O95139 128 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 SLC25A14O95258 325 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-201ENST00000328923 F11P03951 625 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 BCHEP06276 602 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 FABP4P15090 132 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 GALNSP34059 522 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 APLNRP35414 380 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 AHRP35869 848 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 OPRD1P41143 372 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 MTNR1AP48039 350 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF84P51523 738 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 OR7A5Q15622 319 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 NDUFA9Q16795 377 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 ISXQ2M1V0 245 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 LRRC37A5PQ49AS3 106 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 LYPLAL1Q5VWZ2 237 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 LHX8Q68G74 356 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 NRROSQ86YC3 692 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 BPIFB2Q8N4F0 458 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 OR5D16Q8NGK9 328 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 LKAAEAR1Q8TD35 194 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 AKR1E2Q96JD6 320 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 SUSD3Q96L08 255 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 A0A1W2PQY0 241 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 CPED1A4D0V7 1026 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 ADAM10O14672 748 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 FFAR1O14842 300 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SMAD9O15198 467 aaKnown RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 KDELR3O43731 214 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 QDPRP09417 244 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 TYMPP19971 482 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 IL2RGP31785 369 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 DCTDP32321 178 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF177Q13360 481 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SLC9A5Q14940 896 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 KCNMB1Q16558 191 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 DHRS11Q6UWP2 260 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 IL34Q6ZMJ4 242 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 TTLL10Q6ZVT0 673 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SLC24A5Q71RS6 500 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SERPINA9Q86WD7 417 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 HORMAD2Q8N7B1 307 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 NAXEQ8NCW5 288 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 OR2L8Q8NGY9 312 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 ZCCHC10Q8TBK6 192 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 SMIM14Q96QK8 99 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 UTP23Q9BRU9 249 aaKnown RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 UBQLN3Q9H347 655 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 FKRPQ9H9S5 495 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 TMEM161AQ9NX61 479 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 TNFSF18Q9UNG2 199 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 GPR55Q9Y2T6 319 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-201ENST00000328923 CKAP5Q14008 2032 aa10.9□□□□□ -0.67
SHMT2-201ENST00000328923 TRIOBPQ9H2D6 2365 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 CCDC187A0A096LP49 1063 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 GGT3PA6NGU5 568 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-201ENST00000328923 CBR3O75828 277 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 EOMESO95936 686 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 PTHLHP12272 177 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 ST6GAL1P15907 406 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 TACR2P21452 398 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 AGTR1P30556 359 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 GRK4P32298 578 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 DLSTP36957 453 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 SLC6A12P48065 614 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 GATMP50440 423 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 CD81P60033 236 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 NKAIN2Q5VXU1 208 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 GLB1LQ6UWU2 654 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 SYT9Q86SS6 491 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF280BQ86YH2 543 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 C1QL4Q86Z23 238 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 HIST3H2BBQ8N257 126 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 SPPL3Q8TCT6 385 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 RGP1Q92546 391 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-201ENST00000328923 RELTQ969Z4 430 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 TM4SF18Q96CE8 201 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 PPP1R16AQ96I34 528 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 EBPLQ9BY08 206 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 TEX101Q9BY14 249 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 CERS4Q9HA82 394 aa10.89□□□□□ -0.67
SHMT2-201ENST00000328923 MRPL17Q9NRX2 175 aaKnown RBP10.89□□□□□ -0.67
SHMT2-201ENST00000328923 POT1Q9NUX5 634 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms