RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 CAMK1GQ96NX5 476 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 IL17FQ96PD4 163 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 NRTNQ99748 197 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 ZNF251Q9BRH9 671 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 PINK1Q9BXM7 581 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 CHST6Q9GZX3 395 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 PIGMQ9H3S5 423 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 GLIPR2Q9H4G4 154 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 SUV39H2Q9H5I1 410 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLRN1-202ENST00000327047 GPN3Q9UHW5 284 aaPredicted RBP6.75□□□□□ -1.33
CLRN1-202ENST00000327047 PLAGL1Q9UM63 463 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 DENND4CQ5VZ89 1909 aa6.75□□□□□ -1.33
CLRN1-202ENST00000327047 FAM186AA6NE01 2351 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TRAV14DV4A0A0A6YYC5 116 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 KANTRA0A1W2PQU2 76 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 FEZF1A0PJY2 475 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 LRIT2A6NDA9 550 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MEIS3P1A6NDR6 274 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ACOD1A6NK06 481 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 B9A039 149 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 LEFTY2O00292 366 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SULT1B1O43704 296 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 DXOO77932 396 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TBX6O95947 436 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 HMGN2P05204 90 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SBK2P0C263 348 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RD3LP0DJH9 198 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TMIGD3P0DMS9 266 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SRMP19623 302 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MAPK3P27361 379 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TEAD1P28347 426 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 NPBWR1P48145 328 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 NCBP2P52298 156 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RGS8P57771 180 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 HTRA4P83105 476 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 STX4Q12846 297 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PDZK1IP1Q13113 114 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SNTB1Q13884 538 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 KRT33BQ14525 404 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ZNF750Q32MQ0 723 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 NDUFAF6Q330K2 333 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PCGF3Q3KNV8 242 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 DHRS7BQ6IAN0 325 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TMEM220Q6QAJ8 160 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 C5orf46Q6UWT4 87 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 GDF7Q7Z4P5 450 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 HSD11B1LQ7Z5J1 315 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CMTM8Q8IZV2 173 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 AMER3Q8N944 861 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CHST14Q8NCH0 376 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 OR52L1Q8NGH7 329 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 DUSP19Q8WTR2 217 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SLC41A3Q96GZ6 507 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MCHR1Q99705 422 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RIOK2Q9BVS4 552 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TLNRD1Q9H1K6 362 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CACYBPQ9HB71 228 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ADGRL4Q9HBW9 690 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 NOX4Q9NPH5 578 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 HCFC1R1Q9NWW0 138 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ANKRD10Q9NXR5 420 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 WSB2Q9NYS7 404 aaPredicted RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 AHSPQ9NZD4 102 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 EPHA6Q9UF33 1036 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MIOXQ9UGB7 285 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ST6GALNAC2Q9UJ37 374 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SLC7A7Q9UM01 511 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 FOXJ3Q9UPW0 622 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PPIL1Q9Y3C6 166 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TRBV2A0A0J9YWF9 115 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SLC5A10A0PJK1 596 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MEX3AA1L020 520 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RFPL4AA6NLU0 287 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 OR6C76A6NM76 312 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 RFPL4AL1F8VTS6 287 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SCAMP1O15126 338 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 ERAL1O75616 437 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CKMP06732 381 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 BMP7P18075 431 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 DPP4P27487 766 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CSF2RBP32927 897 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 BSGP35613 385 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PSMB10P40306 273 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 KHKP50053 298 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CLDN2P57739 230 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 FXYD6P3P58550 94 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 SNRPD1P62314 119 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PPP2CBP62714 309 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PPIAP62937 165 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 PPP2CAP67775 309 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 DECR1Q16698 335 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 KHDRBS2Q5VWX1 349 aaKnown RBP6.74□□□□□ -1.33
CLRN1-202ENST00000327047 CORO6Q6QEF8 472 aa6.74□□□□□ -1.33
CLRN1-202ENST00000327047 MBOAT2Q6ZWT7 520 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms