RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 AKR7A3O95154 331 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 OR6A2O95222 327 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 APEHP13798 732 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PCYT1AP49585 367 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 P2RY4P51582 365 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PUDPQ08623 228 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CD47Q08722 323 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 MAD2L1BPQ15013 274 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PDSS1Q5T2R2 415 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 HBMQ6B0K9 141 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 VASNQ6EMK4 673 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PAQR6Q6TCH4 344 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 IGFN1Q86VF2 1251 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ZHX1-C8orf76Q96EF9 292 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 POLDIP3Q9BY77 421 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 EXO5Q9H790 373 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 FANCFQ9NPI8 374 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF71Q9NQZ8 489 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PNPLA3Q9NST1 481 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF226Q9NYT6 803 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ACACBO00763 2458 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 A0A1B0GVC2 190 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 H0YC42 278 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 M0R129 80 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ARPC3O15145 178 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SURF4O15260 269 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 IDH3BO43837 385 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CRYABP02511 175 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CD14P08571 375 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SUCLG1P53597 346 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 RAC3P60763 192 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 MYBPC1Q00872 1141 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TEKQ02763 1124 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 NADK2Q4G0N4 442 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 UBQLNLQ8IYU4 475 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 MEIOBQ8N635 442 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 OR8J1Q8NGP2 316 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TRUB1Q8WWH5 349 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 KATNB1Q9BVA0 655 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SRXN1Q9BYN0 137 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 INIPQ9NRY2 104 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TVP23BQ9NYZ1 205 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SPRR3Q9UBC9 169 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PCDHGB5Q9Y5G0 923 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF407Q9C0G0 2248 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PKD1L2Q7Z442 2459 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 AQP7O14520 342 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 RNF13O43567 381 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TXNDC12O95881 172 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 IGHMP01871 453 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 GABRB1P18505 474 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 AGFG1P52594 562 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CLDN15P56746 228 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CTXN1P60606 82 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SNRPGP62308 76 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 H3F3AP84243 136 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 FOXK2Q01167 660 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 SNAPC1Q16533 368 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 UGT2A3Q6UWM9 527 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PTCHD4Q6ZW05 846 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TMEM99Q8N816 258 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 OR10D3Q8NH80 312 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 RHOXF1Q8NHV9 184 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 ERMAPQ96PL5 475 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 NAA11Q9BSU3 229 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 CMC2Q9NRP2 79 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 IER3IP1Q9Y5U9 82 aa9.18□□□□□ -0.94
VIPAS39-201ENST00000327028 NPIPB13A6NJU9 1138 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 NPIPB4C9JG80 1138 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 C11orf98E9PRG8 122 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 MS4A18H0YCH9 400 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 IMPA2O14732 288 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CXCL13O43927 109 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 PRKYO43930 277 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 F13BP05160 661 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CARD18P57730 90 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 RPS3AP61247 264 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 ERVK-25P63136 954 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 EFNB1P98172 346 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 MS4A18Q3C1V0 323 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 GPR139Q6DWJ6 353 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 FAM122BQ7Z309 247 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TCEANCQ8N8B7 351 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 LSM14AQ8ND56 463 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TMEM163Q8TC26 289 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 APH1BQ8WW43 257 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 UBE2FQ969M7 185 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 NR1H4Q96RI1 486 aaPredicted RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TIGARQ9NQ88 270 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 RASSF1Q9NS23 344 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 KLHL21Q9UJP4 597 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 RASD1Q9Y272 281 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms